Gene Elen_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1220 
Symbol 
ID8415511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1465636 
End bp1466685 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID645024183 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003181579 
Protein GI257790973 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.585278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0173539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA ACACCGCGAG CAACGCGACC GCGTCCGCGC AAGCGGGCGC GGTCGAGCTG 
GACATCCTGC TCGACGTCCA GCACCTCACG AAGCGTTTCG CTGCAGACAC GAACTTCTTC
GGCAAGGCGA CCTCCTACGT GCAGGCCGTG GACGACGTGA GCTTCCAAAT CCGCAAGGGA
GAGGCGTTCG GCCTGGTGGG CGAATCGGGC TGCGGCAAAA CCACCGTAGG CAAGATGCTG
GTGAACCTGC TGAAGCCCAC GTCGGGCAAA ATCGTCTTCG ACGGCAAAGA GCTGACGGCG
ATGAAGCCGG CCGAGCGCAA GCAGTACTGC AAAGACATCC AGCTGATCTT CCAGGATCCC
TACGCGTCGC TCAACCCGCG CATGCGCATC GGCGACATCA TCGCCGAGCC CATCATCACG
AACAACATAC TGCCGAAAGA CCAGGTGGAG GATCGCGTGA ACGAGCTGTT AGAGCGCGTG
GGCCTGGCGA ACTACATGCG CAACCGCTAC CCCCACGAGT TCTCGGGCGG CCAGCGCCAG
CGCGTGGGCA TCGCGCGCGC CCTGGCCGTG AACCCGAAGC TCATCGTGTG CGACGAGCCG
GTGTCGGCAT TGGACGTGTC CATCCAAGCG CAGGTGTTGA ACCTGCTGGA CGAGCTGAAA
GAGCAGTTCG GCCTGACGTA CCTGTTCATC GCCCACGGCC TGAACGTGGT GAAGCACGTG
TCCGACCGTG TAGGCGTCAT GTATCTGGGC AAGATGATGG AGATCGCCCC CAAGAAGGCG
CTGTACGCCG ATCCGCTGTC GCCGTACACG CAGGCGCTGC TGTCGGCCAT CCCGTCGGTC
GACCCCGCCG CCAAGAAGGA GCGCATCATC CTGGAAGGCG ACGTGCCCTC GCCCATCGAC
CCGCCGCCGG GCTGCCGCTT CGCCAGCCGC TGCTTCGCGA AGGTGAACGG CTGCGACGAG
GTCATGCCTC CTTTGGTCGA GGTGAAGCCC GATCATTGCG TGGCCTGCCA CCGCTACGAC
AAGGGCGGCC CCGGGACGGC CGTGATCTGA
 
Protein sequence
MSENTASNAT ASAQAGAVEL DILLDVQHLT KRFAADTNFF GKATSYVQAV DDVSFQIRKG 
EAFGLVGESG CGKTTVGKML VNLLKPTSGK IVFDGKELTA MKPAERKQYC KDIQLIFQDP
YASLNPRMRI GDIIAEPIIT NNILPKDQVE DRVNELLERV GLANYMRNRY PHEFSGGQRQ
RVGIARALAV NPKLIVCDEP VSALDVSIQA QVLNLLDELK EQFGLTYLFI AHGLNVVKHV
SDRVGVMYLG KMMEIAPKKA LYADPLSPYT QALLSAIPSV DPAAKKERII LEGDVPSPID
PPPGCRFASR CFAKVNGCDE VMPPLVEVKP DHCVACHRYD KGGPGTAVI