Gene Elen_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1181 
Symbol 
ID8415472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1416382 
End bp1417074 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID645024144 
Productpentapeptide repeat protein 
Protein accessionYP_003181540 
Protein GI257790934 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.329473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT CCGCACGCCG ATCCGCCGAT ACCCGGCCGC CCCGTCCGGC CCGTCCCGAC 
ATTCCGGGCG AGCTGACGGA GGTGGACGAC CTCGCCGGCT GGATCGAGCG CGACAACGGC
GGCGACCTGC GCGTGTCCCA TGTTCTCGTG CGCAGGGACG CGGCCGAGGG GGCCGACTTC
TCCCTCGTCG AGCTGACCGA GTCCCGCGTG GAAGGGTGCT CGTTCGTCGG CTGCGATTTC
GATCGGGCCA TGGCGTCCGA CGTGGCGTTC TCGAACTGCG ATTTCTCAAA TTCCACGTTC
TCCCAGGCGA ACTTCACGCG CTGCACGTTC TCTTCGTGCA AGTTCACGGG CGCCGACCTG
CTGGAGGCGG TGCTGTCGCG CGTGGAGGTG CGCGATTCCA CGTTCGCCTA CGCGTCCGTC
GCGAAGGGGA AGCTGGAAGA CGTGAGCGTG AGATCCACCG ACTTTTCCGG CGCTGACTTG
GCCGAGCTGC GACAGCGCCG CGTCGAACTC GACGACGTGC GCTTCGCGGG CACTAGCTTC
TTCCGTGCGA GCTTGGACGG TGTGGATTTA TCCTCGTGTC GATTGGCCGA TATCGTGCTG
TCGGATACGA TGGAGGAGCT GCGCGGCTGC TCGATGGACC TGTTCCAGGC TGCCGGCATC
GCGCGTCGAC TGGGCGTGAA CGTCAAAGAC TAG
 
Protein sequence
MTESARRSAD TRPPRPARPD IPGELTEVDD LAGWIERDNG GDLRVSHVLV RRDAAEGADF 
SLVELTESRV EGCSFVGCDF DRAMASDVAF SNCDFSNSTF SQANFTRCTF SSCKFTGADL
LEAVLSRVEV RDSTFAYASV AKGKLEDVSV RSTDFSGADL AELRQRRVEL DDVRFAGTSF
FRASLDGVDL SSCRLADIVL SDTMEELRGC SMDLFQAAGI ARRLGVNVKD