Gene Elen_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1173 
Symbol 
ID8415464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1408562 
End bp1409281 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID645024136 
ProductABC transporter related 
Protein accessionYP_003181532 
Protein GI257790926 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.470964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.243393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG CGGACGTGCT GTATGTGGAG GACTTGGCCT ATCGCTATGG CAAGACGGAG 
GTGTTCGCCG GCGCGTCGCT TTCGTTGCGG GCGGGCGAGG TCGCGTTTCT CACCGGGCCG
AACGGGGCAG GTAAGTCGAC GCTTCTGCGC TGCCTGGCCG GCTGGGACGC GCCTGCCGAG
GGGCGGGTGG AGCTGTGCGG GAAGCGCTTC GACGGCGCGG ATCGCGCGCA GCGAAGCCTG
CTGGCCTTCG TGCCCGACGT CCCCTCGTTC TACGACGACC TTACAGCGGG CGAGCATATC
CGCTTCGTGC GGCAGGCGAA CCGTATGAGC GCCGACGACG ACCCGTCGGA GCGGCTCATG
GCTCTCTTCG GCCTCGACGG CCATCGCGAC CAGCTGCCCT CGGCATACTC GCGCGGCATG
CGTCAGAAAC TGGCGCTCGT GCTGGCCTTC GCCCGCGCGC CGCGCTTGCT GCTGCTCGAC
GAACCGTACG GGCCGCTCGA CCCGGACGCC TCCGGGGTGT TGAGCGGGCT TATCGAGGAA
GCGCGCAGCG CCGGCGCGGC CGTGCTGGCC AGTTGCCATC ATGACGTGCC CAATCTGCGG
CCGGACGCGC TGCTGCGTCT GGAAGACGGC CGCCTCGCCG TGCTCGATGC GCGTGACGGA
GGCGAAGACC GCATGGTGCG GAACGCGTTC GGCGCGAGCT TCGGAGGCGA CGATGCATGA
 
Protein sequence
MSEADVLYVE DLAYRYGKTE VFAGASLSLR AGEVAFLTGP NGAGKSTLLR CLAGWDAPAE 
GRVELCGKRF DGADRAQRSL LAFVPDVPSF YDDLTAGEHI RFVRQANRMS ADDDPSERLM
ALFGLDGHRD QLPSAYSRGM RQKLALVLAF ARAPRLLLLD EPYGPLDPDA SGVLSGLIEE
ARSAGAAVLA SCHHDVPNLR PDALLRLEDG RLAVLDARDG GEDRMVRNAF GASFGGDDA