| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1165 |
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| Symbol | |
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| ID | 8415456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | + |
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| Start bp | 1399306 |
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| End bp | 1401048 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645024128 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003181524 |
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| Protein GI | 257790918 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.313123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.393198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC TGTTCGACGA AGCGCTGTCG TTCGTGAGCG ACACGGTGCG CCGGTTTTAC
GCCGGAACGG GCATCGAGCA GGTGGTTGAG CGCTTTTCCG ACGATCTCTC GTGGATAGGA
GCGGGCGAGG TGGAATTCTC GACCAGCGCC GAAGAGATCG TGTCGTATTT GACGAAGCGC
GCGCCGCTTG CGCCTCCGTG CGAGGTTTTC GACGAGGAGT TTTACCTGGT GAACGTCACG
GAGTGCAGTT GCACCGTGAT AGGTCGCTAC AATGTGCGCA CGCGCGAGGA CTCGCAGCTG
GTGATCGAAG AGCGCCAGCG GTGCAGCTAC GAGCTGGTGG ATGCGGGCGG AGAGCTCAAG
ATCCGCCATG TCCATGCGTC GAATCCCTAT CGGGCGATGA GGGACGAGCG GTACTTCCCC
TTCGAGGCCG GCAGGCAGAC CTACGAGTAC TTGCAGCAGC TCGTGCGCGA GAAAACGGCC
ACCATCGATC TGCTCACCGA TAACATCACG GGCGGCCTCA AGATGAGCGA GGACGACGAC
GTGTACACGC TGTCCTACGT CAACGAGGGT CTGGCGCGCA TGCTCGGCTA CACCATCGAA
GAGCTGATGG AGGTGAGCGG CGGCACGGCG GCGGGCATGG TGCATGCTCC CGATCGCGCG
CAGGCGCTCG CCGATGTCGC GCGCTGCTTC GCCGAGGGGC CTACGTACGA GACGGAGTAC
CGCGCGCGCC GCAAGGACGG TACGCTGGCG TGGGTGCTCG ATTCGGGTCG CAAAGTGCAA
ACCGAGGACG GTGCGGTGAA GATCGGCAGC GTGCTCGTGG ACATCACGTC GCGCAAGGAG
GCGGAGATCG CGCTCGCGGT GGAGCGGGAA CGCTACCGCA TCGCGCTGCG CAGCGTTACC
GACGTGCTGT TCGAATACGA TATCGAGCGC GACGTGCTGG TCGAGTACGA GCGAGCGCCC
GGCGCGGACG GCAGCGCGCT TCCCGAGGAG CGTCGGATCG AGCGCTACAC CGAGATGATC
GCAGAAGGCG GGCGCATCCA TCCCGACGAC TGCGAGCGCC TGGCCGAGGC GCTGCAGGGC
GGCGAGTCGG TGACGCTCGA CGTGCGTCGT CTTTTCGGGG GCTCGCCGGA AGGCGACTGG
CGTTGGACGC GCATGCACGC CATGATGCTG TACGACCGCA ACGGAGCGCC CGTGCGCACC
ATCGGCAGCT GGCGAGACAT CACCGCGGAG CGTCGTCAGC TTGAAGACCT CGCCGACCAG
GCGCGACGCG ATCCTCTGAC CGGGCTGTTC AATCAGAGCG CCACCTCCGA GCTCATCGAC
CCGCTGTTGC GCACCGGTGC GAAACGCGGC GTGGGAGCTC TGCTCGTCAT CGACATCGAC
GACTTCAAAG GCGTGAACGA TACGTTCGGC CATCTGGCCG GCGACGAGCT GCTGTCGAAC
GTGGCGCGGT CGCTTGAAGA GGCGTTGGCG TCGGACGACG CCATCGTTGC GCGTATCGGC
GGCGACGAGT TCGTCGCGTA TCTGCCGCAC GCCGATCTCG TTCAGGCGCA GCGGGCTGCT
CTGCGGGTGA ACGGGCAAAG ATGCGAAGGC CGCGCGCTCG TCACGCTCAG CGTGGGCGGA
GCGTTGGCCG GTATCGACGG AGGAACGTAC GAATCGCTGT TCGACGCGGC CGACCGTGCG
CTGTACGAGG CGAAGCGCAA GGGTAAGGAT CGCGTCAGCT TCGCGGGCGA AGCGCGTCCT
TGA
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| Protein sequence | MNPLFDEALS FVSDTVRRFY AGTGIEQVVE RFSDDLSWIG AGEVEFSTSA EEIVSYLTKR
APLAPPCEVF DEEFYLVNVT ECSCTVIGRY NVRTREDSQL VIEERQRCSY ELVDAGGELK
IRHVHASNPY RAMRDERYFP FEAGRQTYEY LQQLVREKTA TIDLLTDNIT GGLKMSEDDD
VYTLSYVNEG LARMLGYTIE ELMEVSGGTA AGMVHAPDRA QALADVARCF AEGPTYETEY
RARRKDGTLA WVLDSGRKVQ TEDGAVKIGS VLVDITSRKE AEIALAVERE RYRIALRSVT
DVLFEYDIER DVLVEYERAP GADGSALPEE RRIERYTEMI AEGGRIHPDD CERLAEALQG
GESVTLDVRR LFGGSPEGDW RWTRMHAMML YDRNGAPVRT IGSWRDITAE RRQLEDLADQ
ARRDPLTGLF NQSATSELID PLLRTGAKRG VGALLVIDID DFKGVNDTFG HLAGDELLSN
VARSLEEALA SDDAIVARIG GDEFVAYLPH ADLVQAQRAA LRVNGQRCEG RALVTLSVGG
ALAGIDGGTY ESLFDAADRA LYEAKRKGKD RVSFAGEARP
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