| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1132 |
|---|
| Symbol | |
|---|
| ID | 8415422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1361806 |
|---|
| End bp | 1362780 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645024094 |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_003181491 |
|---|
| Protein GI | 257790885 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.349362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0040252 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGA TTTTCAAGAA CAAGCATGGC ATGGTGCGAT CCGGATGGAT CATCGCGCTG
TGCATGGCCG CGTTCTACGC TCTCGGCTAT GCGTTCTCCG CCCTGCTCAT CGATGCTTTG
CGCATGATTC TTGATGCCGC CAGCCTCGAT GCTGCGTCAT ACGATGCGCT CGTCGATTGG
ATGAGCGCAT CGGTGCTGCC CGTTGCCCTG CAGTTCTTGA CGGAGGGCAT CATGCTGGCC
GTCCCCTTGG CTGCGTGGAG GATCATGAGG TATCGTTGGG AAGACCTCGG CCTCCGTGAT
TTTCGCGCCC GGTTCAAGAA AGACGGCGTT GTCGGGATGG CGCTGGGTTT CGCGGCGTGC
AGCGCCATCT TCCTGCTGCT GCTCGCCACC GGCAACGTGG TAGTCGAGGG GGTCAATTCG
CCGTTTTCTC TCTCGCTTTT CGCCTGGGTG CTCGTGTTCG TTGCGGTGGG CATCGCCGAA
GAGGTCATGA ATCGCGGGTT CATCATGTCG GTTTTGCGGA GGACGAACAG CAGGTTCCTG
GTGATCGTCG TGCCGTCGCT GATCTTCGGG TTGATCCATC TCACCAATCC GAACGTCACC
TTGCTCTCGG TCGTCAACAT CGTATTGCTT GGGATCGCCC TTTCCCTCAT GTACTACAAA
TCGGGCAATG TATGGATGTG CATAGGGTTC CATATCGCTT GGAACCTGTT CCAGTCGGTC
GTGTACGGCA TGCCGGTGAG CGGCTTGGAT GTTCCCGCGT TCCTGGTGAG CGCCTACCCG
GTTGGAAACC TGCTCAACGG GGGCGGTTTC GGCATCGAGG GCGGCGTGCT CACCACTGTT
GCCGCCGTGT CCGTCATGGC GTTCACCCTT TTCTATTACC GCACGTCCGA GTATCGTTTC
TTCGGCGACC ACGCGAATGC GCCGCAGAGC CCGGCGGCGG TCGGGCAGGA CGAGGAGGCT
CCCGCGATTC GATAG
|
|---|
| Protein sequence | MKMIFKNKHG MVRSGWIIAL CMAAFYALGY AFSALLIDAL RMILDAASLD AASYDALVDW
MSASVLPVAL QFLTEGIMLA VPLAAWRIMR YRWEDLGLRD FRARFKKDGV VGMALGFAAC
SAIFLLLLAT GNVVVEGVNS PFSLSLFAWV LVFVAVGIAE EVMNRGFIMS VLRRTNSRFL
VIVVPSLIFG LIHLTNPNVT LLSVVNIVLL GIALSLMYYK SGNVWMCIGF HIAWNLFQSV
VYGMPVSGLD VPAFLVSAYP VGNLLNGGGF GIEGGVLTTV AAVSVMAFTL FYYRTSEYRF
FGDHANAPQS PAAVGQDEEA PAIR
|
|---|
| |