| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1070 |
|---|
| Symbol | |
|---|
| ID | 8415360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1292950 |
|---|
| End bp | 1293264 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645024033 |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003181430 |
|---|
| Protein GI | 257790824 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.188637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000000498444 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAC AATTGAAACG AGGTTTCCTC GATGTTTGCG TGCTCGCATC GATCAACCGC
CAGGACTCGT ACGGGTACCA GATCGTCAAA GACGTGCCTT CGAGTTTGCA TTTGACCGAA
TCGACGCTGT ACCCCCTGCT CAAACGCTTG GAATCAGCGG GGCTGCTGAC GGTTTACGCC
ATCGAGCACA ACGGGCGCCT GCGCAAGTAC TATCGCATCA CGCCGGCCGG GGTCACGTAC
CTCGACGAGT TCTTGAAGGA TTGGGACGAC GTATTGGACG TCTACGAGTA TGTGAAACGA
GGTGCCAACC GATGA
|
|---|
| Protein sequence | MDAQLKRGFL DVCVLASINR QDSYGYQIVK DVPSSLHLTE STLYPLLKRL ESAGLLTVYA
IEHNGRLRKY YRITPAGVTY LDEFLKDWDD VLDVYEYVKR GANR
|
|---|
| |