Gene Elen_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1007 
Symbol 
ID8415297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1218964 
End bp1219746 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID645023971 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003181368 
Protein GI257790762 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.118116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT GGGGAATGCT CATCGACCTC AAGCGCTGCG CGGGATGCGG GGCATGCGTC 
GTGGCATGCC AGCTGCAGAA CAACCAGGGC CCGGGCGTAT CCTGGGTGAA GCTCGACACG
GTGGAATGGG GCGAGGCCGC CGGCGAGGCG GGGCGCGCGT ACCTGCCGCA CGCCTGCATG
CACTGCGAGA ACCCCGAATG CGTGTCGGTC TGCCCCACCG GCGCCAGCCA GAAGCTCGAC
GACGGCGTGG TGATCGTGGA TTACGACGCG TGCATCACCT GCGGCTACTG CATGTCGGCG
TGCCCGTACG GCGCGCGCGT GCTCAACGAG GGCAAGGGCA ACTACTTCGG CGAGTACGCC
CAGGCGCCCT ACGAGGCCTA CGGCGTCCAG CGCTCGCGCG TGGTCGAGAA GTGCATCTTC
TGCCGTGAGC GCGCGGAGGA GGGGCTGCCC GTCGCCTGCG TGCTCAACTG CCCGGCGCAC
GCGCGCTTCT TCGGCGATCT CGACGACCCC GAGAGCGACG TCAGCAAGCG CATCGCCCAG
GGCGACGCCG TGCGCGTGGA CGAGACGTCG TTCTACTACG TGCCCATGAA CGGCATGGAC
GAGAGCCTGC TGCCCACCGC CGCGGGCGGC GCCTATGCCG AAAGCTCGAA GGCGGCTCCC
GGCATCGACC CCGTTGCGGC AACGATAGGC GTCGCCGCGG TGGCCGCGGT CGGCGTCGGC
GTGGGCGTCG GGGTGAAGAA GGCGAAGGCC CAGGCCAAGG CCGACGAAGC GAAGAGCGAG
TAG
 
Protein sequence
MTTWGMLIDL KRCAGCGACV VACQLQNNQG PGVSWVKLDT VEWGEAAGEA GRAYLPHACM 
HCENPECVSV CPTGASQKLD DGVVIVDYDA CITCGYCMSA CPYGARVLNE GKGNYFGEYA
QAPYEAYGVQ RSRVVEKCIF CRERAEEGLP VACVLNCPAH ARFFGDLDDP ESDVSKRIAQ
GDAVRVDETS FYYVPMNGMD ESLLPTAAGG AYAESSKAAP GIDPVAATIG VAAVAAVGVG
VGVGVKKAKA QAKADEAKSE