| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1002 |
|---|
| Symbol | |
|---|
| ID | 8415292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1212096 |
|---|
| End bp | 1213544 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645023966 |
|---|
| Product | amino acid carrier protein |
|---|
| Protein accession | YP_003181363 |
|---|
| Protein GI | 257790757 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.663557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.482987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAC TACTCAACAC CATCGACGCA TTCGTATGGG GCCCCGCGAT GATCGCGCTT
CTGCTGGGGT CTCATCTGTT CTTCACCTTC AAGACGGGGT TCATCCAGCG CAAGCTGCCG
CAGGCCATCA AGCTGTCGCT GTCGAGCGAC CCCGAGGGCA AGGGCGACAT CAGCCACTTC
GGCGCGCTGG CCACGGCGCT GGCCGCCACC ATCGGCACCG GCTCCATCGT GGGCGTGGCC
ACGGCCATCC TCGCGGGCGG ACCGGGCGCG GTGTTCTGGA TGTGGATCAC CGGCGTGTTC
GGCATCGCCA CGAAGTACGC CGAGGTGTAC GCGGCCGTGA AGTACCGCGT GCGCGACCAC
AACGGCGCCA TGCTCGGCGG CGCCATGTAC ATCTGGGAGC GCGCGTTCAG GCGCAACGCC
GAGGGCAAGC GCGACCCGAG CCCCGGCGGG CACACTCCCT GGTGGGCGAA GCTCGGTGCC
GTGGCGTTCG CCGCGTTCGC CGCCATCGCG GCCATCGGCA CCGGCTCGGC CGTGCAGGCG
TCGGCCATGT CCGGCATCAT CACCTCGAAC GTGGACGTCC CCGCGTGGGT CGTCGGCGTG
ATCATCGTGG TGCTGGTGTC CGTGGTCATC TTCGGCGGCG TGCAGTCCAT CTCGAAGGTG
TGCGAGCGCC TCGTTCCCAT CATGGCCGTC GCCTACGCGG GCGGCTGCCT CGTCATCCTC
GCGTTCAACT GGGCGCTCAT CGGCGACGCG CTGGGGCTCA TCCTGGAATG CGCGTTCACC
TCGAAGGCCG CGTTCGGCGG TGCGGTGGGC TCGGGCATCA TGATGGCGCT GCAGTTCGGC
TGCGCGCGCG GTTTGTTCTC GAACGAGTCG GGCCTGGGGT CGGCCCCCAT CGTGGCCTCG
GCGGCCTCCA CGCGCAACCC GGCGCAGCAG GCGCTCGTGG CGATGACCGG CACGTTCTGG
TCCACCGTGG TCATCTGTGC GCTCACGGGC ATCGTGCTCG TGTCCACGAT GCTGGCGAAC
CCCGACATCG CGTCGTCCAT CATGGCGAAT CCCACCGTCT ACTCCGGCGC GATGCTGGCC
AGCGAGGCGT TCGCGAAGAT CCCCTACATC GGCACGCCCA TCCTCGTGCT GGGCATGGTG
GCGTTCAGCT ACACCACTAT CCTCGGCTGG TCGTACTACG GCAACCGTTG CATCACGTAC
CTGTTCGGGC GTTACGCCAT CCGTCCGTAC CAGGTGATCT ACGTGGCCGT GGCCTTTCTC
GGCGCCATCG GCGTGGGCGA CATCGTGTGG ACGATCTCGG ACATCGGCAA CGCGCTCATG
GCCATCCCCA ACATCATCGT CGTGCTGCTG CTGAGCGGCA TGATCGCGCG CGAGACGCGC
CACTACGTGT ACGACGGCAA CCTCGACGAG GTCGACGACA CGCCCATCCC GCAGCTGGAG
GGGAAGTAG
|
|---|
| Protein sequence | MFELLNTIDA FVWGPAMIAL LLGSHLFFTF KTGFIQRKLP QAIKLSLSSD PEGKGDISHF
GALATALAAT IGTGSIVGVA TAILAGGPGA VFWMWITGVF GIATKYAEVY AAVKYRVRDH
NGAMLGGAMY IWERAFRRNA EGKRDPSPGG HTPWWAKLGA VAFAAFAAIA AIGTGSAVQA
SAMSGIITSN VDVPAWVVGV IIVVLVSVVI FGGVQSISKV CERLVPIMAV AYAGGCLVIL
AFNWALIGDA LGLILECAFT SKAAFGGAVG SGIMMALQFG CARGLFSNES GLGSAPIVAS
AASTRNPAQQ ALVAMTGTFW STVVICALTG IVLVSTMLAN PDIASSIMAN PTVYSGAMLA
SEAFAKIPYI GTPILVLGMV AFSYTTILGW SYYGNRCITY LFGRYAIRPY QVIYVAVAFL
GAIGVGDIVW TISDIGNALM AIPNIIVVLL LSGMIARETR HYVYDGNLDE VDDTPIPQLE
GK
|
|---|
| |