Gene Elen_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1000 
Symbol 
ID8415290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1210422 
End bp1211027 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID645023964 
Producthypothetical protein 
Protein accessionYP_003181361 
Protein GI257790755 
COG category[S] Function unknown 
COG ID[COG3601] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0805634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.842682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA ACGCACCGGG CACCAACGCC CAGGACACGT ACGAATTCAC CAACACCAAC 
AAGTGGGACA CCCGCCAGCT CGTGACGATG GCGCTCATGT GCGCGATCGG CGTGCTGCTG
TCGTTCGTGG AGTTCCCGCT GCTACCCGGC GTCACCTGGC TCAAGTACGA CGCCTCCGCC
ATGCCCGCCA TGGTGTGCGG CTTCGCCTTC GGCCCGGCGG CCGGCCTCGC GGTGGGCGTC
GTGGGCGCCG TCATCCACGG CATCCTCATG GCCGACTTCT CGGGCGCCGT CATGAACATC
CTCGTGGTGG CCGGCTTCAT CCTGCCCGCC GCGCTCGTGT ACCGCCGTTC GCGCACGTTC
AAGAGCGGCG TCGTCGGCCT CGTGCTGAGC GCCATCACGG CCACCGTCAT GGCCATCCTG
GGCAACCTCG TCATCACGCC GATGTGGCTG GGCGTGCCGC TCGACGCCGT CGTGGCCATG
ATCCTGCCCA TCCTCACGCC GTTCAACCTC ATCAAGGCCG GCATCAACGC GGTGCTCACG
CTCATCGTGT ACAAGAGCAT CTCCAATTTG ATCACACCCA AGAAGAAGCA GGTGAAGGGA
CGCTAA
 
Protein sequence
MTGNAPGTNA QDTYEFTNTN KWDTRQLVTM ALMCAIGVLL SFVEFPLLPG VTWLKYDASA 
MPAMVCGFAF GPAAGLAVGV VGAVIHGILM ADFSGAVMNI LVVAGFILPA ALVYRRSRTF
KSGVVGLVLS AITATVMAIL GNLVITPMWL GVPLDAVVAM ILPILTPFNL IKAGINAVLT
LIVYKSISNL ITPKKKQVKG R