Gene Elen_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0983 
Symbol 
ID8415273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1189886 
End bp1191031 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID645023947 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_003181344 
Protein GI257790738 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.410572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGT TCGACTGCGA GCTCCAAGCG ACGAGCGGCC ACGCCCGCGC GCTGTCCTAC 
GAAACGGCGC ACGGGTCGTT CCAAACGCCC ATGTTCATGC CGGTGGGCAC GAGCGCCTCG
GTGAAGGGCG TCACCGTGGG CCAGCTGAAC GATCTCAACG CCCAGGTGGT GCTGGCCAAC
ACGTACCACC TGTCGCTGCG CCCCGGTGCC GACGTAGTGG CCGAGGCCGG CGGCGTGCAC
CGCTTCATGA ACTACGACGG CCCCATGCTC ACCGACTCGG GCGGGTTCCA GGTGTTCAGC
CTGGCCGACA CGCTCAAGCT GGACGACGAG GGCCTCACGT TCCGCTCCAT CTACGACGGG
ACCAAGGTGC GCTGGACGCC CGAGAGCAAC ATGGAGATCC AGGAGCAGCT GGGCGCCGAC
ATCGCCATGC AGCTGGACCA ATGCACGCCC TACCCGGCCG AGAAGGCCTT CGTGGCGAAA
GCCGTCGATC TGTCGGCCAA CTGGGCGCGC CGCTGCCTGG CGGCGCATCA GCGCCCCGAC
CAGACGCTGT TCGGCATCGT CCAGGGCGGC ATGGAGCTGG ACCTGCGGCT GGAATCCATC
CGCCGCCTGC GCGAGATCGA GGACGAGAGC CTGGCGCGCG GCGGGCGCCG CTTCGGCGGC
TTCGGCATCG GCGGCTACTC GGTGGGCGAG GATCACGAGG TGATGTTCGA GACGCTGGGC
CCCGTCGCCC GCGCCTGCCC CGAGGACCGT CCGCGCTACC TCATGGGCGT GGGCAACCCC
ACGACGCTCG TGCGCGCGGT GCGCGAGGGC GTTGACATGT TCGACTGCGT GCTGCCCACC
CGCACGGCGC GCATGGGCAC GGCGTTCTCG TCGACGGGTC GCATGAACAT GCGCAACGCG
AAGTTTACGC GCGACTTCGG CCCGCTCGAC CCCGCGTGCA CCTGCCCGAC GTGCCGGAAC
CACAGCCGCG CCTACATCCG CCACCTCGTG AAGCAGAACG AGATGCTGGG CGGCATCCTG
CTGTCCGTCC ACAACCTGCA CTACCTCATC GATCTCATGC GCCGTGCCCG CGAAGCGGTG
CTGGCGGGGG CGTACGAGGA GTTCTACGAA GCCTGGATGG CCAGTCCCGC GGCGAAGGAC
TACTAG
 
Protein sequence
MALFDCELQA TSGHARALSY ETAHGSFQTP MFMPVGTSAS VKGVTVGQLN DLNAQVVLAN 
TYHLSLRPGA DVVAEAGGVH RFMNYDGPML TDSGGFQVFS LADTLKLDDE GLTFRSIYDG
TKVRWTPESN MEIQEQLGAD IAMQLDQCTP YPAEKAFVAK AVDLSANWAR RCLAAHQRPD
QTLFGIVQGG MELDLRLESI RRLREIEDES LARGGRRFGG FGIGGYSVGE DHEVMFETLG
PVARACPEDR PRYLMGVGNP TTLVRAVREG VDMFDCVLPT RTARMGTAFS STGRMNMRNA
KFTRDFGPLD PACTCPTCRN HSRAYIRHLV KQNEMLGGIL LSVHNLHYLI DLMRRAREAV
LAGAYEEFYE AWMASPAAKD Y