Gene Elen_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0946 
Symbol 
ID8415236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1150712 
End bp1151650 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content65% 
IMG OID645023910 
ProductAuxin Efflux Carrier 
Protein accessionYP_003181307 
Protein GI257790701 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.51689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000246572 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGATCTCGC AATTCGCCGA CATATTCGTG CAGATGGTCG TCCTGTTCGC CGTGGGCGCG 
ACAGGTTACG CCGCCAAGCG GCTGAACCTC ATGGACGAGG ACTTCGACAA GAAGTTCTCG
AAGCTCATCC TGAATACGGC GTTGCCGGCG CTTATACTGG CCTCCGTGCT GACCGCCGAA
ACGCTGCCCT CGGCGACGAA GATCCTCTGG ACCGCGGGCG TTTCGTGCGC CAGCTACGTG
GTGCTCGTCG CAATCGGATT CTCCATCACG GCCGCGCTGC GCGTGCCCGA CGGACGCAAA
GGCGTCTTCC GGTTCATGAT GGTGTTCGGC AACACGGGCT TCATCGGCTT CCCCGTGACG
GCGGCTGTTT TCGGCGCGGA GGCGCTCATC TACACGACGG TGTTCAATCT CGCGTTCAAT
GCGCTCGTCT TCACGCTGGG CGTGTGGATG CTCGCCACGG ACAACAAATA CGGCGTGAAG
ATCAAGATGA GCCCGAAGTC GTTCCTCTCG CCGTGCATCG TGGCCAGCGT CGCGTCAATC
GCGCTGGCGT TCGCCGGCAT CCACGGCGTG CCGGTGCTCG GCGAGGCGCT GGACACCCTG
GGCTCGCTCA CCACCCCGGC GGCTATGCTC ATCATCGGCT CGTCGCTGGC CAACGTGCCG
GCGCGCCAGC TGGTGGGCGG GCCGCGCCTC ATGGCGGCCG CGCTCGTGCG CCTGTTGGTC
GCGCCAGCGC TCGTATGGCT GCCGCTGCAT TTCCTCGTGA GCGACCCCGT GCTGCTGGGC
GTGATCGTGC TGCTGTCGGC CATGCCGGTG GCCACGAACG GCACCATGCT GTGCTACCAG
TACGGCGGCG ACAGCAAGAC TATGGCGCAG GGCACGTTCG TAACCACGCT GGGCGCCGTT
TTCACCATCC CGCTGCTCGC CGTGCTGTTC ATGGCGTAG
 
Protein sequence
MISQFADIFV QMVVLFAVGA TGYAAKRLNL MDEDFDKKFS KLILNTALPA LILASVLTAE 
TLPSATKILW TAGVSCASYV VLVAIGFSIT AALRVPDGRK GVFRFMMVFG NTGFIGFPVT
AAVFGAEALI YTTVFNLAFN ALVFTLGVWM LATDNKYGVK IKMSPKSFLS PCIVASVASI
ALAFAGIHGV PVLGEALDTL GSLTTPAAML IIGSSLANVP ARQLVGGPRL MAAALVRLLV
APALVWLPLH FLVSDPVLLG VIVLLSAMPV ATNGTMLCYQ YGGDSKTMAQ GTFVTTLGAV
FTIPLLAVLF MA