| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0945 |
|---|
| Symbol | |
|---|
| ID | 8415235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1149701 |
|---|
| End bp | 1150636 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645023909 |
|---|
| Product | Undecaprenyl-diphosphatase |
|---|
| Protein accession | YP_003181306 |
|---|
| Protein GI | 257790700 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.130471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.000579984 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG AAGCATTGAA GGCCTTCCTC ATCGGCATCG TGGAGGGCAT CACCGAATGG
CTGCCCATCT CCTCGACCGG CCATATGATC CTCGTGGACG AGTTCGTGAA GCTGCAGGTG
TCCGACGAGT TTTTGGCCCT GTTCCTCGTG GTCATCCAGC TGGGCGCCAT CATGGCCGTG
CTCATCCTGT ACTTCCACAA GCTGAACCCG TTCTCGCCGA AGAAGGACGC CGTCGAGAAG
AAGAGCACGT GGCGTCTGTG GGGCATGGTG GCCATCGGCT GCATCCCGGC TGCCGTCATC
GGCCTCTTGT TCGACGATCT GGTGAACGAG TACTTCTACA ACAAGGTGAC CGTGGCGGCC
ATGCTCATCC TGTACGGCGT GGTGTTCATC GTGCTCGAGC GCCGCAATCG CCGTCGACTG
CGCGAGGCCG AAGCCGCCCT CGAGGCGCCG CGCGGCCGCC ATGCGCGCGT GTCGTACGGC
GATGTGTCCG ACGAGGCCGA GGCATCGCTG TTCAAGATCA CCGACGTGGA CGAGATCGAC
TGGAAAACCG CGCTCAAGAT CGGCTGCTTC CAGGTATTGG CCATCATCCC CGGCACCAGC
CGCTCCGGTG CCACCATCAT CGGCGGCATG CTGGCCGGCT GTTCGCGCAC CGCGGCGGCC
GAGTTCACGT TCTTCCTGGC CATTCCCATC ATGTTCGGCT GGGGTCTGGT GAAGTGCATC
AAGTTCGTGG CGGCCGGCAT CGCCATGACC TCCACCGAGA TCCTCGTGCT GGCGGTGGGA
ATCATCACGG CGTTCGCCAT GTCGGTGGTG GCCATCAAGT TCCTCATGGG CTATATCAAG
AAGAACGACT TCACCGCGTT CGGCTGGTAC CGCATCGTCG TAGGCGTGCT GGTGCTGGGC
TACTTCGTCT TCGAAAGCAT GGGCATGCTG CCGTAA
|
|---|
| Protein sequence | MIIEALKAFL IGIVEGITEW LPISSTGHMI LVDEFVKLQV SDEFLALFLV VIQLGAIMAV
LILYFHKLNP FSPKKDAVEK KSTWRLWGMV AIGCIPAAVI GLLFDDLVNE YFYNKVTVAA
MLILYGVVFI VLERRNRRRL REAEAALEAP RGRHARVSYG DVSDEAEASL FKITDVDEID
WKTALKIGCF QVLAIIPGTS RSGATIIGGM LAGCSRTAAA EFTFFLAIPI MFGWGLVKCI
KFVAAGIAMT STEILVLAVG IITAFAMSVV AIKFLMGYIK KNDFTAFGWY RIVVGVLVLG
YFVFESMGML P
|
|---|
| |