Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0939 |
Symbol | |
ID | 8415229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 1143385 |
End bp | 1144458 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645023903 |
Product | integrase family protein |
Protein accession | YP_003181300 |
Protein GI | 257790694 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0828563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAA AGCTTGCCAA GAACGGCACC TGGCTCGCGC AATTCAGGTG CAAGGACAAG TTTGGCAACG AAGTGCACAA ATGCAAGCGC GGGTTCGCGA CGGCGGAAGA GGCGCAGGCT TGGGAGGACG AGTTCATCGC CAGCGCGGGC TGCACCATGG AGATGACGTT CGGCGAGTTC TTCAAGGTTT ACGAAGCCGA TCTTCGCCCC AGGCTGCGCG AGCACACCTG GCGGCAGAAG GAGTACGCGA TCAAGTCGAG GGTGCTGCCC TTCTTCGCGA ACAAGAAGAT GGACGAGATA CGCACCATTG ACATCGTCCG TTGGCAGAAT GCCCTCATGG CGCCCGACGC AAACGACGGA AAGCCCTACA GCGCCACGTA TCTGCGCACG CTCAACAACC AGCTGACCGC CATTCTGAAC CACGCGGAGA GGTACTACGG GCTGAGCCCC AACCCCGCGA TGAGAACCGT GAAGATGGGC GGCAAGGAAG CCCGCACGAT GAATTTCTGG ACCAAGGACG AGTATCTGAG GTTCTCCGAC GCAACGATGG ACGATCCCCG CGCGTTCGTG ATCTTCGAGG TGCTGTACTG GACCGGCGTC CGCGAGGGAG AGCTCCTGGC CCTCACGCCG GACTCGTTCG ATTGGAAGAA ATCGACCATG CGCATCGACA AGTCCTACCA GAGATTGGGC GGCCGCGACG TGATAACCGA CCCGAAGACG CCCAAATCGG TGCGAACCGT GAAGATGTCG CGCTTCCTGG CCGACGAGGT GCGCGATTAC GCGAACCACC ACCCGGAGAT TGGCGAAGGC GATCGCCTGT TCCCCGTGTC GAAGCACTAC ATATCGCACG CGATGCAGCG AGGATGCGCG GCGAGCGGCG TGAAAAAGAT ACGCGTGCAC GATTTGAGGC ACAGCCACGT GAGCCTGCTC ATCAACATGG GCTTCACCGC CCTCGCCATC GCAGACCGCA TGGGGCACGA GGCGACCGAC ATCACCTTCC GCTACGCCCA CCTGTTCCCG AATGTGCAAG ACGACATGGC CAACGAGCTC GAAGAAGAAC GGGGTGGATT CTGA
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Protein sequence | MSVKLAKNGT WLAQFRCKDK FGNEVHKCKR GFATAEEAQA WEDEFIASAG CTMEMTFGEF FKVYEADLRP RLREHTWRQK EYAIKSRVLP FFANKKMDEI RTIDIVRWQN ALMAPDANDG KPYSATYLRT LNNQLTAILN HAERYYGLSP NPAMRTVKMG GKEARTMNFW TKDEYLRFSD ATMDDPRAFV IFEVLYWTGV REGELLALTP DSFDWKKSTM RIDKSYQRLG GRDVITDPKT PKSVRTVKMS RFLADEVRDY ANHHPEIGEG DRLFPVSKHY ISHAMQRGCA ASGVKKIRVH DLRHSHVSLL INMGFTALAI ADRMGHEATD ITFRYAHLFP NVQDDMANEL EEERGGF
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