| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0839 |
|---|
| Symbol | |
|---|
| ID | 8415129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1035183 |
|---|
| End bp | 1037243 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645023805 |
|---|
| Product | Relaxase/mobilization nuclease family protein |
|---|
| Protein accession | YP_003181202 |
|---|
| Protein GI | 257790596 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGC TCAAGACGCT CGCCCGGAAG TTCGGCGGCT GCAAGCAGAT AAAGGACTAC
CTCGCGCGCA ACGGCCGCGC CGTGACGTTC CGCTCAAGCT CAATCGATCT CGATAGCGCC
GGCTGGGACG GGCAGATGGA CGCGACGCGC CAGGTGTTCG GCAAGGACAC CGGGCGAAAG
TACTACCATT TCGTAATCTC ACCCGATCCC GAGGACGGCC TGGATGCCAA GGCGGTAGAC
GCATTGGCAT GCGATTGGGT GCGCGAGCGC TACAGCGGAT ACCAGTGGGT GATCGAGACT
CATATAGATA ACGGCATTCC GCATGCACAT ATCGTCGTCA ACTCCGTCAA CCCCGTTGAC
GGGAGGAAGA TACACCTCGA CGACGATGAC GTGCAGGCCG ACGCGATGGA GTTGCAGAGA
ATCTGCCGCG ACTACGGCTA CACCGCCTTC GACAACTTCA AGTTCACGAG GGACGAGGAC
GGTTCCTGGT ACGCACGCAC GCCGCGCCCC GACCGCCGGC GCGAGGTCGT CTTGCAGGAG
GCGCGCCCGG CGCGCCGTCA TGTGACGGAC GCCCAGCGCC GCGCCAGGTA CAGCGGCAAG
AAACTCTGGA CCGATGCGAT GCACGACGAT ATCGAGTCGG CTTTGCAGGG GTGCCGGACA
TGGCCCGCGC TCGAGAGGCG TTTGGCGGAG AAGGGCTACC GCATCAATAT CAACCGCCGC
GGAGTGCTGA CCTTCTACCC GCCCGAGGGC AAGGGCCATC CCGTGAAGGG TTACAAGCTG
GACGACTCCT ATACGGTCGA GGGATTGCGC GAGCGCCTTG CCGTGCGACT CGAGGGACAG
CGCCCGAACG TCAGGATGTG CACCGAGGAC CTTGTCCCGG ACGTCGTCCT GCCGCCCATG
ACTTTCGAGG CGGTCGCATC CAACAATCTC GAGCGGTCTA AGAGGATCGA GCGCTCCGCC
GCCCGCCTTG CCGCCGCGGC CGACGCCGTG AACATTATCC GCGAGCGCGG CTACCGCTGC
TATGCGGACA TGGCGGCCGA TGCCAGGCGC CTCGCCGCCG AGGTCGACGC GCTCGACGCG
AGGGTCGACG CGCTCAAGCT GGAGGCCGAG CAGACCGCCG AGGCCATCCG CCAGGTCGAG
GTCTACACGT CTTGCGTCGC GCAGTTGACC GCGCGCCCGG AAGGAGCCGA AGCGCTCGCG
GCATGGCGCG AGGACAATGC AGACGAGCTT CGCGAGATGG AATCGATCCG CAAGTGGATG
GCCGAGCGCG GAATCGTGCT CACCGATATG ACATACACGG ACCTCCTCGC ACGCCGCGAC
GGCGTCAGGG CCGACGTGGC GAACCTCGCT TCCATGGCAG TCGATATCCG CAACCGCTCG
CGCCGACTTT CCGCCGCTGT CGATGTCCTG GACTCATCGC AGATGCCGAT TGGCCCCACA
GATGTACGGG GCCGCGGCGA GAGGCAGAAG GGCGCCGGTC ACGGCCTGCG CGACGCCAAG
GTCATCACCG CGAACCAGAC CGCCGAGCTG ACGCGCGAGT ACACGCGCTA TCGCAAGGCC
TATTCGGGGG CCATCGCGGC GGGCGCCCTC ACGCCGGATA AGATCAAGCA GATTGAGCGC
GACCACGAGC GGGCCAAGGC GAAGATCATC GGCGAGCAGC GCGAGGAGGA CCTGCGCGCG
GAACGCTCGG CGTACGGGAT GGCCGGAAGC GAATGGGCGC AGGATGCTCC CGTGACGGTC
GCCGCACCCG GCGGGACGGA CAAGAGGTCG AAGCCCGGAT GGAAGCCGTA CCTCCAACGC
CCCGCGACCG AGAAGCAGAT GAAATATCTC GAAGACCTCG TAGAGTCCGG CATCATCGCG
CAGGCCGACA TCGACAGCCT CGGCGGCGAG CCGACCATCG CGGACGTCAA CGCGCTCCTG
AACTCGCATC CCAAGGTCAA GAACCTGGAG CTTGAGAAGA TGGACGGCGA CGGCGCGGAC
GGCACACGGA CGTACACGCA GACCCGAGAC GATATCGAGG ACGACGGCTA TACGCCGGCG
AACTACACGA GGAGGAGATA G
|
|---|
| Protein sequence | MAMLKTLARK FGGCKQIKDY LARNGRAVTF RSSSIDLDSA GWDGQMDATR QVFGKDTGRK
YYHFVISPDP EDGLDAKAVD ALACDWVRER YSGYQWVIET HIDNGIPHAH IVVNSVNPVD
GRKIHLDDDD VQADAMELQR ICRDYGYTAF DNFKFTRDED GSWYARTPRP DRRREVVLQE
ARPARRHVTD AQRRARYSGK KLWTDAMHDD IESALQGCRT WPALERRLAE KGYRININRR
GVLTFYPPEG KGHPVKGYKL DDSYTVEGLR ERLAVRLEGQ RPNVRMCTED LVPDVVLPPM
TFEAVASNNL ERSKRIERSA ARLAAAADAV NIIRERGYRC YADMAADARR LAAEVDALDA
RVDALKLEAE QTAEAIRQVE VYTSCVAQLT ARPEGAEALA AWREDNADEL REMESIRKWM
AERGIVLTDM TYTDLLARRD GVRADVANLA SMAVDIRNRS RRLSAAVDVL DSSQMPIGPT
DVRGRGERQK GAGHGLRDAK VITANQTAEL TREYTRYRKA YSGAIAAGAL TPDKIKQIER
DHERAKAKII GEQREEDLRA ERSAYGMAGS EWAQDAPVTV AAPGGTDKRS KPGWKPYLQR
PATEKQMKYL EDLVESGIIA QADIDSLGGE PTIADVNALL NSHPKVKNLE LEKMDGDGAD
GTRTYTQTRD DIEDDGYTPA NYTRRR
|
|---|
| |