Gene Elen_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0815 
Symbol 
ID8415105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1012147 
End bp1013991 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content64% 
IMG OID645023781 
ProductATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein 
Protein accessionYP_003181178 
Protein GI257790572 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGG CAGACGGTGA CCGCCTTACA CCGGAACAGG CCGAGGCGCT GAGCGCGCTG 
AGGGACGGGA GGAACGTGTT TCTCTCGGGC AACGCCGGCA CGGGTAAGAG CTACGTGCTC
AACGCCTTCA TATCGGACCT GAAGGCGCGC AATGTCGATT TCCTCGCCCT GGCGCCCACC
GGCATCGCCG CGCTGAACCT CACGGACGGC TCGACGATCC ACCGCACGCT GAAAATCGCG
CCGGGGGTCT GCGCCCCCGA TGGCCCCAAG GGGTCCCGCA AGGTGCTCGA CGCCGCGAAG
GTAATCATCA TCGACGAGAT CTCGATGTGC CGCATCGACC TGTTCGACCA CGTGATGGGG
ATGATCTCCC AGTCCATGAC GCGCAACGGC GCGAAGCAGG TGGTCCTCGT CGGCGATTTC
TTCCAGCTGC CGCCGGTCGT GACCGAACGC GACTCCGCGC TGCTGATGAA GTTCTATCCC
GGAAACCTCC AGGGCTGGTG CTTCAAGTCG AGGTACTGGA CCGGCTTCGA TTTCGAGCCG
CACGTCCTCA AGACGGTCGT GCGCCAATCC GCCCCCGATT TCATCGACAA CCTGAACCGC
GCCCGCGTCG GCGACGCGTC GTGCCTCGAT TACTTCAACG CGCACTCCAG GAGTTCCCGC
GCCTACCTGC CGAAGGACAC GCTCGTGCTG TGCGCCAACA ACCGCATCGC CGACTCGATC
AACCGCGAGA ACGTCGACGC GCTCGACGCC CCGAAAGTCG AGTTCACCGC GGCGGTCACG
GGTATGGTCA ACAGCGGCGA TAAGATGGCG CCGGAGAGGA TCGTCCTGTG CCGCGGCGCC
CGCGTGATGT CGCTCGTGAA CAGCCCTCAG GAGGGTTACG TCAACGGCAC GCAGGGCACC
GTCACCGACG CGTCCGCCGA CGCCGTGACG GTCAAGTTCG ACGGGGCGGA CGAGAAGGTC
CGCATCGAGC GGCACAGATG GGAGATCAAC AAGTCCGAGG CCATCGTCGA GATGGACGAG
GAGGGCAGGC CTGTCAACAG GGTCAAGACT GCCGTCGTGG GTGCCTATAC CCAGATCCCG
CTCAAGCTCG CCTACGCCAT CACCATCCAC AAGTCGCAGG GCCTGACGTT CGATGCCTGC
TGCGTCCACA CGAAAGTCTT CGCCGAGGGC CAGCTGTACG TCGGCCTGTC CCGCGTGCGC
TCCGCCGCCG GCCTCACCGT GTTCCCCAAG ATTGAGCCGA ACCGCCTGAT CGCCAGCCGC
GAGGTCGTGG AGTTCTACGA TTCCCTCGAG CACAGGATGG AGGAGCCGGT CCAAATCGAG
TGCCCGCGCC GCTACGAGTC GCGGGTCCGC GCCTACATCC GAGACCTCAT GGACGGCAGG
GACCCCGACG CCCCCACGCC TCCCGCCCTG GAAGGCGCCC TGGAGAACAG CAAGGGAGGT
ACCCCGGAAC CGGGGACCGA AAGACCGGCT CGAACCCTCG AAGAGAAGAT TGGGGCGGAT
ATAGTTGCCC GTGCCACCTT CGCCCTCAAA TTTGCAGTTT CGAGTGCCAT GTCCAAGGAC
CATCTTGAGG CCAAGATGCT CCTAGCCGGG TACGTACTTG ATTGGGGACG CGCTCCGCAT
GAGCTCTATG TCGTCTGCAA GGAGGGCGGT TATCGCGTCA GCGCATCGGA ACTGGGCATC
CGGCGCTCCG AGATTGAGGC GAGGATTGCG AAAAACTCCG GCTTCGACTT GGGCTCCGCT
CGTCGTCAGC CGAGCCCGTC CGACTCTCGT CCTGGGAGGC GGAAGGGCTC GGCGAAAGAG
TCCGCCGGTC GCACCCGAAA TACACGCAAG GCGAATAAGC GGTAG
 
Protein sequence
MEMADGDRLT PEQAEALSAL RDGRNVFLSG NAGTGKSYVL NAFISDLKAR NVDFLALAPT 
GIAALNLTDG STIHRTLKIA PGVCAPDGPK GSRKVLDAAK VIIIDEISMC RIDLFDHVMG
MISQSMTRNG AKQVVLVGDF FQLPPVVTER DSALLMKFYP GNLQGWCFKS RYWTGFDFEP
HVLKTVVRQS APDFIDNLNR ARVGDASCLD YFNAHSRSSR AYLPKDTLVL CANNRIADSI
NRENVDALDA PKVEFTAAVT GMVNSGDKMA PERIVLCRGA RVMSLVNSPQ EGYVNGTQGT
VTDASADAVT VKFDGADEKV RIERHRWEIN KSEAIVEMDE EGRPVNRVKT AVVGAYTQIP
LKLAYAITIH KSQGLTFDAC CVHTKVFAEG QLYVGLSRVR SAAGLTVFPK IEPNRLIASR
EVVEFYDSLE HRMEEPVQIE CPRRYESRVR AYIRDLMDGR DPDAPTPPAL EGALENSKGG
TPEPGTERPA RTLEEKIGAD IVARATFALK FAVSSAMSKD HLEAKMLLAG YVLDWGRAPH
ELYVVCKEGG YRVSASELGI RRSEIEARIA KNSGFDLGSA RRQPSPSDSR PGRRKGSAKE
SAGRTRNTRK ANKR