| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0792 |
|---|
| Symbol | |
|---|
| ID | 8415082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 986727 |
|---|
| End bp | 988334 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645023758 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003181155 |
|---|
| Protein GI | 257790549 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG GCATCCGCGA GGTGGTCACG TCGGAAAAGG CCGACCTGCT GAACACCGGC
ACGGTGAAGG ACGCGGAAGG GCAATCCGCG TCGACCTTGG CGCAAAGGGA AAGCGCCGCC
ACGCAACGGC AGGCGGCGGC GCGGCCCGAT CCAGGCTGCG CCAAGCCCGC GGAGGGCAAG
CGCGGCAAGT CTAAATGCGG CAAGGATCCC ATCGACGCAG ATCGGCACGC CGCAGACGTC
GCCCGAAAGC CCGCCAAGCT CGAACGGGCG AAGGTCGAGG CGAAATCGGC GGCCATGTCG
GCGCTCGTCG GAGAATTGGA CGATTCGGAG GAGCTTTCCG ACACGCAGCG CGTATACGAC
GCGGCTCGTG CGGGAAAGAG GATCGCGGCG CGCGCGAAAG CCCGAAAGAG CTTAGGGCAA
GAGGGCGGCA AGTCGAACGG CGCCGCAGCC CGAAGCCGTG TGCCGGGCGT GGGCGCGAAG
ACGGGCAACG CCATATCCGC GGGAGCTTCG GCGCAGGGCG CGCCCGCCGC GATGGCGGCC
CGGCCCGACG CCCAAATCCG GCTTGCCGCA GGAGCCGCGA AATCCTCGAC CGCAGCCACC
GGCGCTGCCG GCGCCACAAC GGCCGCGCCC GCAGCGGGGA TCGTCGCCGG AATGCTCATG
TTCGTCGTGA CGATGCTCGC CGTCAGCCAG ATCGCCGGCG CGCTCTTCGG GTTCTGGGAC
AACGAGTCGA AGAAGCAGAG CCTCGCCGGC CTGCCGCCCT ACATCACCTA CGAGATGGTC
GAGGCGGCGC TTGAGGCGCA AGAGGACTAC GGACATCCCG CCGGGTGCAC GATAGCCCAG
ATCATCGTCG AATCGGGGCA AGGCGACCAC ATGAGCAGGC TCGCCACGCG CGACCACAAC
CTGTTCGGGA TGAAATGGGC CCCTTCGTTC GCCGCGGCGC CCGAAGTCGC CGGCAAGGCG
AACTGGGTCA CCGGCGAGGA GGTCGACGGT GCGCACGTGA CCATAACCGA CTCGTTCACG
GTGTTCAAAT CGGACGCGGA CAGCATCAAG TTCAGGAGCC GCGTGTTCCT GGCTAGCTCG
ACCTATTCGG GAAACGCCCT GATCGGGGAA GCTGTTTCCG AGCGGTCCTC CGACAAGATG
GCGGAAGGCC TGAAAGACGC TGGCTGGGCG ACCGACTCGG CCTACGTCGA GAAGCTCAAG
GCCGTGATGG ACCAATACGG GCTGCGCGCT TTCGACGCCA TGGCGCCCGG GGATCTGGCC
AACCCCTCCG CCGGAGGCGC CTCCGTCATC GCGGCTGCGT TCTCGCAGCT CGGCGTGCCC
TACGTATGGG GCGGCACCAC GCCGGGCGTG GGCCTCGACT GCTCGGGGCT CACGCAATGG
TGCTATCGCC AGGCTGGCAT ATCGATACCC CGCAATTCCG AGGACCAGGC GGCCGCGGGA
ACAAAGATCC CGCTTTCGAT GGCGGAGCCG GGCGACGTGC TCTGGCGGCC CGGGCACGTG
GCAATCTATA TAGGAGACGA CTCCTACATC CACGAGCCCC AGACGGGCGA CGTGTGCAAG
GTGTCGCAAG GAATCAGCTA CTTCACCTGC GCTCTCAGGT TCAAATAA
|
|---|
| Protein sequence | MSAGIREVVT SEKADLLNTG TVKDAEGQSA STLAQRESAA TQRQAAARPD PGCAKPAEGK
RGKSKCGKDP IDADRHAADV ARKPAKLERA KVEAKSAAMS ALVGELDDSE ELSDTQRVYD
AARAGKRIAA RAKARKSLGQ EGGKSNGAAA RSRVPGVGAK TGNAISAGAS AQGAPAAMAA
RPDAQIRLAA GAAKSSTAAT GAAGATTAAP AAGIVAGMLM FVVTMLAVSQ IAGALFGFWD
NESKKQSLAG LPPYITYEMV EAALEAQEDY GHPAGCTIAQ IIVESGQGDH MSRLATRDHN
LFGMKWAPSF AAAPEVAGKA NWVTGEEVDG AHVTITDSFT VFKSDADSIK FRSRVFLASS
TYSGNALIGE AVSERSSDKM AEGLKDAGWA TDSAYVEKLK AVMDQYGLRA FDAMAPGDLA
NPSAGGASVI AAAFSQLGVP YVWGGTTPGV GLDCSGLTQW CYRQAGISIP RNSEDQAAAG
TKIPLSMAEP GDVLWRPGHV AIYIGDDSYI HEPQTGDVCK VSQGISYFTC ALRFK
|
|---|
| |