Gene Elen_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0738 
Symbol 
ID8415028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp930794 
End bp931474 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID645023709 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003181106 
Protein GI257790500 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000482292 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TGATCGTGGA GGACGACCGA CTCCTCTCAA ACGCCCTAGC CCGCAGCCTG 
CGGGACGCTT ACGCCGTCGA CCAGGCGTTC GACGGCGAAG AAGGCCTGTT CTACGCCGCT
CAGGACGTGT ACGACCTCGT CGTGCTCGAC GTGATGCTGC CCGAACGCGA CGGCTTCTCG
GTGCTGGAAG CCTTGCGCGC ACAAGGCGTG GACACGCCCG TGCTCATGCT GACGGCTCGG
AGCGCGACCG CCGACAAGCT TCGCGGACTG CGCTCGGGAG CCGACGACTA TCTCGCAAAG
CCCTTCGACC GGGACGAGCT GCTCGCCCGC ATCGAGGCCA TCCTGCGCCG CACGACGGGC
CGGCGCGACG TGGGCATCGT TGCGTTCAAG GAGCTTGCGC TGCACACGCG AACCCGGCAG
GCCTTCATCG CAGACGAGCC CCTCGCTCTG AAAGGCAAGC AGTACGACAT TCTCGAATAC
CTGGTCAGCC ACCAGGGCAG TCTCATCTCG AAAGAGCGGT TGTTCGACAA GATATGGGGA
TTCATGTCGG ACACGTCCTC GAACGTCGTG GAGGTGTACG TGAGCGCGCT GCGCAAAGCG
CTGGCTCCGA CCGGCTACGA TCGCTACATC AAGACCATCC GCGGAGCAGG CTACCTGTTC
ACGGAGGACG ATCATGACTG A
 
Protein sequence
MKLLIVEDDR LLSNALARSL RDAYAVDQAF DGEEGLFYAA QDVYDLVVLD VMLPERDGFS 
VLEALRAQGV DTPVLMLTAR SATADKLRGL RSGADDYLAK PFDRDELLAR IEAILRRTTG
RRDVGIVAFK ELALHTRTRQ AFIADEPLAL KGKQYDILEY LVSHQGSLIS KERLFDKIWG
FMSDTSSNVV EVYVSALRKA LAPTGYDRYI KTIRGAGYLF TEDDHD