Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0714 |
Symbol | |
ID | 8415004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 893015 |
End bp | 896551 |
Gene Length | 3537 bp |
Protein Length | 1178 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645023686 |
Product | DNA-directed RNA polymerase, beta subunit |
Protein accession | YP_003181083 |
Protein GI | 257790477 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR01635] phage virion morphogenesis (putative tail completion) protein [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0122097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCAAG GAAAAACGAC TGATCAGACC AGCCTTTACA GGGATCGGCG CAGCTTTGCG AAGATTCCGG ACGTCATGGA CGTCCCCAAC CTCATCGCTA TCCAGACGGA CAGCTTTGAG TTTTTCAAGG GCGAGGGCCT GGCGCAAGCG TTCCAGGATA TCAGCCCGAT CGAGAACAAC ACCAAGGACA TGTGCGTGGA GTTCGGCCGC CACGAGTTCG GCGAGCCGAA GTACACCGTG GACGAGTGCA AGGAGAAGGA CGTCTCCTAT CAGGCGCCGC TGTTCGTGGA AATCCGCTTC ATCAACCGCG AGACCGGCGA GATCAAGGAG CAGGACGTCT TCATGGGCGA CTTCCCGCTC ATGACGCCGC GCGGCACGTT CATCATCAAC GGCACGGAGC GCGTCGTCGT CTCCCAGCTG GTGCGCTCCC CGGGCGTGTA CTTCGCCTCC GAGCGCGATA AGGCGTCCGA CAAGACGCTG TTCAACGCGA AGGTCATCCC CAGCCGCGGC GCGTGGCTGG AGTTCGAAAC CGACAAGCGC GACATCCTGT CCGTGCGCAT CGACCGCAAG CGCAAGCAGC CCGCTACGCT GCTCGTCCGC GCCCTCGGCC TCGCCGAGAC GCGCGAGGAG ATCATCGAGC TCCTCGGCAA CGACGAGATG GTGCTGCGCA CGCTCGACCG CGACCCGGCT ACCACGAAGG AAGAGTCGCT GATCGAGCTG TACAAGCGCT TCCGTCCCGG CGAGCCGCCC ACCATCGACT CCGCCCGCAC GCTGCTGGAG GGCCTGTTCT TCAACCCGCA GCGCTACGAC CTGGCGAAGG TCGGCCGCTA CAAGATCAAC AAGAAGCTGG GCTTCGACCC CGACTACGAA GCCTCCACGC TCACCGACGA CGACATCGTG CGTACGATGC AGTACATCGT GGCGCTGCAT GCCGGCGACG AAGGCGTGCA GACCGACGAC ATCGACCACT TCGGCAACCG CCGCATCCGC ACGGTGGGCG AGCTGATCCA GAACCAGTTC CGCATCGGCC TGTCCCGCAT GGAGCGCGTC GTGCGCGAGC GCATGAGCAT GCAGGAGCCC GACGAGATCA CGCCGCAGAG CCTCGTGAAC ATCCGCCCCA TCGTGGCGGC CATCAAGGAG TTCTTCGGCT CCTCGCAGCT GTCCCAGTTC ATGGACCAGA CGAACCCCGC CGCCGGCATC ACGCACAAGC GCCGTCTGTC GGCCCTCGGC CCGGGCGGCC TGTCCCGCGA GCGCGCCGGC TTCGAGGTGC GCGACGTCCA CACGTCCCAC TACGGCCGCA TGTGCCCCAT CGAGACGCCT GAAGGCCCGA ACATCGGCCT CATCGGCTCG CTGGCCACCT ACGCCCGCAT CAACCCCTAC GGCTTCATCG AGACGCCGTA CCGCCGCGTC GTCGACGGCA AGGTCACCGA CGAGGTGGAC TACCTCACGG CCGACGAGGA GGAGAACTAC ACCATCGCGC AGGCCAACGA CCTGTTCGAC CCCGAGACGC GCAAGTTCGG CACGTTCGAC GACCAGGGCG TGTTCCACGA GGCCGTCCGC GTGCTCTGCC GTACGAAGGA CGCCGCCGGC GTGTTCGGCG AGCCCGACGA GGTGGCGCCC GAGCTGGTGA ACTACATGGA CGTGTCCCCG CGCCAGATGG TTTCGGTGGC CACCTCCCTC ATCCCGTTCC TCGAGCACGA CGACGCGAAC CGTGCCCTCA TGGGCTCGAA CATGCAGCGC CAGGCCGTGC CGCTGCTGCG CCCCGACGCG CCGCTGGTGG GCACCGGCAT CGAGCACCGC ATCGCGGTCG ACTCCGGCGA GATCCTGGTC GCCCAGAACC CGGGCGTCGT CGACTACGTG GACGGCCAGA CCATCATCGT GCTGAACAAC GACGGCGAGT ACGACGAGTA CCTCGTGCCG AAGTTCCAGC GCTCCAACCA GTCGGGCTGC ATCAACCACC GCCCCATCGT CCGCAAGGGC GACGAGGTGC AGGCGGGCGA CGTGCTGGCC GACGGCCCCA GCTGCGACGG CGGCGAGCTC GCGCTCGGCC AGAACCTCAT GGTGGCCTAC ATGCCGTGGG AAGGCTACAA CTACGAGGAC GCCATCATCG TGTCCGAGCG CGTGGTTGCC GAAGACCTGC TCACGTCCAT CCACATCTCC GAGTACGAGG TCGACGCGCG CGACACGAAG CTGGGTCCCG AGGAGATCAC CCGCGAGATC CCGAACATCT CCGACGACAT GATCAGCGAC CTCGATGCCG ACGGCATCAT CCGCGTGGGC GCCGAGGTGT TCCCGGGCGA CGTGCTGGTG GGCAAGGTCA CGCCGAAGGG CGAGACGGAG CTCACGGCCG AGGAGCGCCT GCTGCGCGCC ATCTTCGGCG AGAAGGCCCG CGAGGTGCGC GACACGTCCC TCAAGGTGCC CCACGGCTCC GGCGGCCGCG TCATCGGCAT GAGCCGCTTC AGCCGCGACG CCGGCGACGA GCTGGCTCCG GGCGTCAACG AGCTCGTGCG CATCTACGTG GCCCAGAAGC GCAAGGTGCA GCAGGGCGAC AAGCTGTCCG GCCGCCACGG CAACAAGGGC GTCATCTCCC GCGTGCTGCC GGTGGAGGAC ATGCCCTACC TCGCCGACGG CACCCCCATC GATGTCATCC TCAACCCCCT GGGCGTTCCT TCCCGAATGA ACGTGGGCCA GCTGCTGGAG AACCACCTCG GCTGGGCCGC GAAGTGGGGC TGGGACGACG CTGAGGAAAC CGACGCCGTG GTGGAGGGCC CGATGCACGT GGCCACGCCG GTGTTCGACG GCGCCACGGA GAAGGAGATC TCCGATGCCA TCGAGAAGGC GAACCGCAAC CTCATCAACA AGAACCATGC CACGTACGGC GACCTGGCGC GCGACGAGTT CGTGCCGCAG CTGTCCCGCA CGGGCAAGAC GTGGCTGTAC GACGGCCGCA CGGGCGAGAA GTTCCGCGAG CCCATCACCG TGGGCCAGAG CTACATCCTG AAGCTCGGCC ACATGGTGGA CGACAAGATC CACGCGCGTT CGACCGGCCC CTACAGCTTG ATCACCCAGC AGCCGCTGGG CGGCAAGGCG CAGTTCGGCG GCCAGCGTTT CGGCGAGATG GAAGTGTGGG CGCTGTACGC GTACGGCGCA TCGAACGTGC TGCAGGAGAT CCTCACGGTG AAGTCCGACG ACACCGCCGG CCGCGTGAAG TCCTACGAAG CCATCGTCAA GGGCGAGAAC ATCCCCGCCC CCGAGGTGCC CGAGAGCTTC AAGGTTCTCG TGAAGGAAAT GAAGTCGCTG TGCCTGAACG TCGAGCTGGA GGGCCACGAT CATCGCACGA TCGACGTGAC CCAGGACATC GACGGCCAGG AAGACGGCGA TCGCGCGCTG TACGAGGCCA TCGCGGCCGA CGCGCGCAAG ACCGAAGAAG ACGACGCGGC CAATGCGCTC GACAGCATTG CCGCCGAGCT GGGAGAGCTG ATGGGCGATA GCAACAACGA TACGAACGAC CTGATCGGTG AGGGAGAGGA GCGATAA
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Protein sequence | MAQGKTTDQT SLYRDRRSFA KIPDVMDVPN LIAIQTDSFE FFKGEGLAQA FQDISPIENN TKDMCVEFGR HEFGEPKYTV DECKEKDVSY QAPLFVEIRF INRETGEIKE QDVFMGDFPL MTPRGTFIIN GTERVVVSQL VRSPGVYFAS ERDKASDKTL FNAKVIPSRG AWLEFETDKR DILSVRIDRK RKQPATLLVR ALGLAETREE IIELLGNDEM VLRTLDRDPA TTKEESLIEL YKRFRPGEPP TIDSARTLLE GLFFNPQRYD LAKVGRYKIN KKLGFDPDYE ASTLTDDDIV RTMQYIVALH AGDEGVQTDD IDHFGNRRIR TVGELIQNQF RIGLSRMERV VRERMSMQEP DEITPQSLVN IRPIVAAIKE FFGSSQLSQF MDQTNPAAGI THKRRLSALG PGGLSRERAG FEVRDVHTSH YGRMCPIETP EGPNIGLIGS LATYARINPY GFIETPYRRV VDGKVTDEVD YLTADEEENY TIAQANDLFD PETRKFGTFD DQGVFHEAVR VLCRTKDAAG VFGEPDEVAP ELVNYMDVSP RQMVSVATSL IPFLEHDDAN RALMGSNMQR QAVPLLRPDA PLVGTGIEHR IAVDSGEILV AQNPGVVDYV DGQTIIVLNN DGEYDEYLVP KFQRSNQSGC INHRPIVRKG DEVQAGDVLA DGPSCDGGEL ALGQNLMVAY MPWEGYNYED AIIVSERVVA EDLLTSIHIS EYEVDARDTK LGPEEITREI PNISDDMISD LDADGIIRVG AEVFPGDVLV GKVTPKGETE LTAEERLLRA IFGEKAREVR DTSLKVPHGS GGRVIGMSRF SRDAGDELAP GVNELVRIYV AQKRKVQQGD KLSGRHGNKG VISRVLPVED MPYLADGTPI DVILNPLGVP SRMNVGQLLE NHLGWAAKWG WDDAEETDAV VEGPMHVATP VFDGATEKEI SDAIEKANRN LINKNHATYG DLARDEFVPQ LSRTGKTWLY DGRTGEKFRE PITVGQSYIL KLGHMVDDKI HARSTGPYSL ITQQPLGGKA QFGGQRFGEM EVWALYAYGA SNVLQEILTV KSDDTAGRVK SYEAIVKGEN IPAPEVPESF KVLVKEMKSL CLNVELEGHD HRTIDVTQDI DGQEDGDRAL YEAIAADARK TEEDDAANAL DSIAAELGEL MGDSNNDTND LIGEGEER
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