| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0678 |
|---|
| Symbol | |
|---|
| ID | 8414968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 858355 |
|---|
| End bp | 859515 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645023652 |
|---|
| Product | agmatine deiminase |
|---|
| Protein accession | YP_003181049 |
|---|
| Protein GI | 257790443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03380] agmatine deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.421408 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA TTCACGAGAG CGTTTCCACC CCGAAGGCCG ACGGCTACCG CATGCCCGGC
GAGTTCGAGC CGCAGACCCG CATCTGGATG GCGTGGCCGC ACCGCACCGA CACGTGGGCC
TGGGGCGCGA AGCCGGCTCA GAAGCAGTAC GCCGACGTGG CGCGCGCTAT CGCCGAGTTC
GAGCCCGTCA CCATGTGCGT GAACCAGGTG GACTACGCCA ACGCCAAGGC CGTGTTCGAG
GACGACGAGA ACGTCACCGT CGTCGAGATG ACCACCGACG ACGCGTGGGT GCGCGACACC
GGCGCCACCT GGGTGGTCAA CGACGAGGGC GACAAGCGCG CCGTGCATTG GCACTTCAAC
GCCTACGGCG GCTTCGAGAA CGGCCTGTAC TTCCCGTGGG ACAAAGACGA GCAGATCGCC
CTCAAGATGG CCGAGATGAG CGGCTGCCGT CGCTATCGCC CCGAAAGCTT CATCCTCGAG
GGCGGCTCCA TCCACGTGGA CGGCGAGGGC ACGGTCATCA CCACCGACAT GTGCCTGCTC
GATCCCGGCC GCAACGCGTC CGTGACCGAC TACGAGCCCT GGTCCGAGGA GCTGCGCGCG
TACTGCGACG AGCAGCTGAA GAAGTACCTG GGCGTGGAGA AGGTCATCTG GGTCAAGGAC
GGCATCGACC CCGAGGAGAC GAACGGCCAC ATCGACGATG TCGCCCAGAT CGTCGCTCCC
GGCAAGGTGC TGTGCATCTG GTCCGACGAC CCGGACTACC CGTTCTACAA CGAGTGTCAT
GCCGCTTACG AGACGCTGTC CAACGCCGTG GACGCCAAGG GCCGCAAGCT CGAGGTGACC
AAGCTCTGCA TGCCCGTGAA GCCGCTGTAC ATGGACCAGG CGTCCTGCGA CTCCATCGAC
ACCGAGGAGT ACGCCGAGCC GCGCGTGGCC GATGAGCCGC TGATCGCGTC GTACATGAAC
TTCCTCATCG TCAACGGCGG CGTCATCGTG CCGCAGTACG GCGACGAGAA CGACGCGCTG
GCCGTCCAGC AGATCCAGGC TGCGTTCGAC GAGGCGTGGG GCGAGGGCGC GTACAAGGCC
GTGGGCGTGA AGACCGACCA GGTGGTCTTC GGCGGCGGCA ACATCCACTG CATCACCCAG
CAGGAGCCGG CCGGCAAGTA G
|
|---|
| Protein sequence | MKTIHESVST PKADGYRMPG EFEPQTRIWM AWPHRTDTWA WGAKPAQKQY ADVARAIAEF
EPVTMCVNQV DYANAKAVFE DDENVTVVEM TTDDAWVRDT GATWVVNDEG DKRAVHWHFN
AYGGFENGLY FPWDKDEQIA LKMAEMSGCR RYRPESFILE GGSIHVDGEG TVITTDMCLL
DPGRNASVTD YEPWSEELRA YCDEQLKKYL GVEKVIWVKD GIDPEETNGH IDDVAQIVAP
GKVLCIWSDD PDYPFYNECH AAYETLSNAV DAKGRKLEVT KLCMPVKPLY MDQASCDSID
TEEYAEPRVA DEPLIASYMN FLIVNGGVIV PQYGDENDAL AVQQIQAAFD EAWGEGAYKA
VGVKTDQVVF GGGNIHCITQ QEPAGK
|
|---|
| |