| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0658 |
|---|
| Symbol | |
|---|
| ID | 8414948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 836230 |
|---|
| End bp | 837222 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645023633 |
|---|
| Product | Polysulphide reductase NrfD |
|---|
| Protein accession | YP_003181030 |
|---|
| Protein GI | 257790424 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.245596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.00748855 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGC AAACGATATG GAGTTGGCAA CCCGCCCTGT ACCTGTTCTT GGGCGGCATG
GGCGCCGGCG CGTTCGTGAT GGCGGCGGTG CTGTTCCTGA TCGACCGGAC GCGTCATCGC
CTGATCGTGT GCGTGTCGAT GTGGGCTGCG CTAGCCAGCC TTGCGGTGGG TCTGCTGTTG
CTGCTTTCCG AGCTCGTCAC GCCGCTGCGA GGCCTGATGA TGTGGCAGAG TTTCGGCCAC
TTCACCTCGT GGATGACCTA CGGCGCCTGG GGCGCGTTCG CGGCGATGGC GGTGTTCGCG
GTGTCGGCGT TGTTGGCGAC GCGCCCGGTG GGCGTGTGGC TGGCGAAGAA GTGGAAGTGG
TTCGAGAAGC GGGGCGTCGC GCTGCGGCGG GTGCTCGCGG TGATCGGCAT CGTGCTGGGC
GCGTTCGTGG CGGTGTACAC GGGCATGCTG CTTATGGCGG CCGGCAGCGT TCCTCTGTGG
AGCACTCCGT TGCTGCCGGC GCTGTTCACG GTGTCGGCCT TCGATACGGG CGTGGCGTTG
GTGGAGCTGG TGGCGCTCGC GCTGTCGAAG AAGGATGCCC TTGCTCCCAA GGCGCGCGTG
CTCATGGAGC GGATCGTCGT GGTGCTTGTG CTGGTCGAGA TAGCGGTGTT GGCGGCGTTC
TTTGCGGTCA TGCTGGGAGG CGACGTCCAG ACGGCGGTGG GCGCGACGGC TGCGGCTTCT
GCGGCGCTGC TGCTGACGGG TGATCTCGCA GCCTGCTTTT GGGCTCTGGT GGCAGCGTGC
GGGTTGGCGA TGCCGTTGGC CATGGCCGTG GCGGGGCTTG TGCTACACAA GCGCGGCAAG
AAGAAGCCCG GTATGAAGCA GCATGGCGGA ACGCTGATGG CGGCGTGCGC CGTGGGCGCT
CTGATAGGCG GGTGCGCGCT CCGCTTCCTG ATCCTCGCTG CCGGCATGCA TGCCGACCTG
GTTGCCGAAA CGGTGATGAG CCTGATCGGA TAG
|
|---|
| Protein sequence | MELQTIWSWQ PALYLFLGGM GAGAFVMAAV LFLIDRTRHR LIVCVSMWAA LASLAVGLLL
LLSELVTPLR GLMMWQSFGH FTSWMTYGAW GAFAAMAVFA VSALLATRPV GVWLAKKWKW
FEKRGVALRR VLAVIGIVLG AFVAVYTGML LMAAGSVPLW STPLLPALFT VSAFDTGVAL
VELVALALSK KDALAPKARV LMERIVVVLV LVEIAVLAAF FAVMLGGDVQ TAVGATAAAS
AALLLTGDLA ACFWALVAAC GLAMPLAMAV AGLVLHKRGK KKPGMKQHGG TLMAACAVGA
LIGGCALRFL ILAAGMHADL VAETVMSLIG
|
|---|
| |