Gene Elen_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0643 
Symbol 
ID8414933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp819281 
End bp820558 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content48% 
IMG OID645023620 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_003181017 
Protein GI257790411 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.120868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAC GCGACACATT GGCGGTGCAA GCGAAGAATC TTCTGAACAG GGGGTTCTTT 
CATATACTGG GCTCAACCCT TACGAACAAG CTGATCGTGT TCGCTTCGAA TATCCTCATA
GTGAGATTCT TGACGCAAGA CGAATACGGC GTCTTCTCCT ACGCCAACAG CATATATTCG
ATCGTTCTTC TTTTTACGGG GCTTGGACTG ATAAGCGGTT TGTTGCAGTT TAGCTCAGAA
AAAAGACCGG TCGAAGAGAA GTTCGAAATA CAAAGGTACG TGTTGACGGT CGGGCTATTC
ATAGATGCGG TCATAATGAT GCTTCTTGTT TTTGTCGGAT ATGGAGCAGG GCTTTCAATT
GCAGGCTCGG GGCATTGCTT AGCAATGCTT GCTCCCTTGA TTCCTCTGGA TTACTTTTTC
CAGTACGCAA GCAGCATACT GCGTTCAAGG AAACTCAATA AAGAATACTC CATGTTGCTG
AACGTCAATA CGATTGGATA TACGGGGCTG AGCTGTGTCG GAGCCTTTGC GGCGGGTGTG
CCGGGAGTGA TCAGTGGTAG GTACGCCGCC TACGCTATCA CTATTTCTGT CGCTGTAATT
CTATTGAAGG GCGTCGGCTT CCCCCTTCGA TCCACTAAGT TCCTCTCTTC AAAGAAAGCG
GTCGACTTAT GGAAGTTTTC GCTTCCGACG GGGATATCGA GCGTGTTCAA CTCGGTAGTG
TACCTCTTGG ATGTGCTTAT GGTGGGTATT ATCGTAGCGA GTTCGATCGA CGTGGCGTGT
TACAAGGTCG CTACGATGCT CCCGGAAGGT TTTCTTTTCA TTCCGCAGTG CATCGTCATA
TTCGCCTTGC CTTATTTTGC TGAACACCGT TTGGATTCAG TATGGTTCTC GAAACATGCT
AGAGTGCTTC TTTTTGGGAG TCTTGTTCCT ATGGCTGTCA TTGCGGTCGT TCTCTTCATT
TGGGCGCCGG ACATTATCAA ATTGCTATGG GGGGAGGAGT ATGTTGATGC GGCTACGGCA
TTTCGAATAA TTTCTTTGAG CCTGATTGTA TCCCCGTTGC GAACCGTAAG CGTCAATCTC
CTAGCTTGTC TTCATCGTGT TCGCTTCAAT CTTGTTGTTT CGGTTGTATC TCTGGCTGCG
AACGTCGCTC TGATCGTCCC CCTAACGTTT GCTTTCGGCA TTGTTGGTGC GGCGTTGGCT
ACCGTTTCGA CAACGGTTCT CGTATCGCTG CTTTCTTTGA GAGGCTTGCG CTCCTCTCTC
AAAGAAAGCG ATAAGTAA
 
Protein sequence
MSIRDTLAVQ AKNLLNRGFF HILGSTLTNK LIVFASNILI VRFLTQDEYG VFSYANSIYS 
IVLLFTGLGL ISGLLQFSSE KRPVEEKFEI QRYVLTVGLF IDAVIMMLLV FVGYGAGLSI
AGSGHCLAML APLIPLDYFF QYASSILRSR KLNKEYSMLL NVNTIGYTGL SCVGAFAAGV
PGVISGRYAA YAITISVAVI LLKGVGFPLR STKFLSSKKA VDLWKFSLPT GISSVFNSVV
YLLDVLMVGI IVASSIDVAC YKVATMLPEG FLFIPQCIVI FALPYFAEHR LDSVWFSKHA
RVLLFGSLVP MAVIAVVLFI WAPDIIKLLW GEEYVDAATA FRIISLSLIV SPLRTVSVNL
LACLHRVRFN LVVSVVSLAA NVALIVPLTF AFGIVGAALA TVSTTVLVSL LSLRGLRSSL
KESDK