Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0643 |
Symbol | |
ID | 8414933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 819281 |
End bp | 820558 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645023620 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003181017 |
Protein GI | 257790411 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.120868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATAC GCGACACATT GGCGGTGCAA GCGAAGAATC TTCTGAACAG GGGGTTCTTT CATATACTGG GCTCAACCCT TACGAACAAG CTGATCGTGT TCGCTTCGAA TATCCTCATA GTGAGATTCT TGACGCAAGA CGAATACGGC GTCTTCTCCT ACGCCAACAG CATATATTCG ATCGTTCTTC TTTTTACGGG GCTTGGACTG ATAAGCGGTT TGTTGCAGTT TAGCTCAGAA AAAAGACCGG TCGAAGAGAA GTTCGAAATA CAAAGGTACG TGTTGACGGT CGGGCTATTC ATAGATGCGG TCATAATGAT GCTTCTTGTT TTTGTCGGAT ATGGAGCAGG GCTTTCAATT GCAGGCTCGG GGCATTGCTT AGCAATGCTT GCTCCCTTGA TTCCTCTGGA TTACTTTTTC CAGTACGCAA GCAGCATACT GCGTTCAAGG AAACTCAATA AAGAATACTC CATGTTGCTG AACGTCAATA CGATTGGATA TACGGGGCTG AGCTGTGTCG GAGCCTTTGC GGCGGGTGTG CCGGGAGTGA TCAGTGGTAG GTACGCCGCC TACGCTATCA CTATTTCTGT CGCTGTAATT CTATTGAAGG GCGTCGGCTT CCCCCTTCGA TCCACTAAGT TCCTCTCTTC AAAGAAAGCG GTCGACTTAT GGAAGTTTTC GCTTCCGACG GGGATATCGA GCGTGTTCAA CTCGGTAGTG TACCTCTTGG ATGTGCTTAT GGTGGGTATT ATCGTAGCGA GTTCGATCGA CGTGGCGTGT TACAAGGTCG CTACGATGCT CCCGGAAGGT TTTCTTTTCA TTCCGCAGTG CATCGTCATA TTCGCCTTGC CTTATTTTGC TGAACACCGT TTGGATTCAG TATGGTTCTC GAAACATGCT AGAGTGCTTC TTTTTGGGAG TCTTGTTCCT ATGGCTGTCA TTGCGGTCGT TCTCTTCATT TGGGCGCCGG ACATTATCAA ATTGCTATGG GGGGAGGAGT ATGTTGATGC GGCTACGGCA TTTCGAATAA TTTCTTTGAG CCTGATTGTA TCCCCGTTGC GAACCGTAAG CGTCAATCTC CTAGCTTGTC TTCATCGTGT TCGCTTCAAT CTTGTTGTTT CGGTTGTATC TCTGGCTGCG AACGTCGCTC TGATCGTCCC CCTAACGTTT GCTTTCGGCA TTGTTGGTGC GGCGTTGGCT ACCGTTTCGA CAACGGTTCT CGTATCGCTG CTTTCTTTGA GAGGCTTGCG CTCCTCTCTC AAAGAAAGCG ATAAGTAA
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Protein sequence | MSIRDTLAVQ AKNLLNRGFF HILGSTLTNK LIVFASNILI VRFLTQDEYG VFSYANSIYS IVLLFTGLGL ISGLLQFSSE KRPVEEKFEI QRYVLTVGLF IDAVIMMLLV FVGYGAGLSI AGSGHCLAML APLIPLDYFF QYASSILRSR KLNKEYSMLL NVNTIGYTGL SCVGAFAAGV PGVISGRYAA YAITISVAVI LLKGVGFPLR STKFLSSKKA VDLWKFSLPT GISSVFNSVV YLLDVLMVGI IVASSIDVAC YKVATMLPEG FLFIPQCIVI FALPYFAEHR LDSVWFSKHA RVLLFGSLVP MAVIAVVLFI WAPDIIKLLW GEEYVDAATA FRIISLSLIV SPLRTVSVNL LACLHRVRFN LVVSVVSLAA NVALIVPLTF AFGIVGAALA TVSTTVLVSL LSLRGLRSSL KESDK
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