Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0628 |
Symbol | |
ID | 8414918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 802075 |
End bp | 802731 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645023605 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003181002 |
Protein GI | 257790396 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.504351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGCGG AAACCGAAAA GAAGCGGAAG AGCGGGCTGA CCCGGGACGT CATCGTGGAT ACCGCGTATC GCATGATCGA TCGCGACGGC ATGGGCGCAT TCACGATGCG TGCCCTCGGC GCGGAGCTGG GCGTGTCGGC CATGGCGTTC TACGCGCACT TTTCCTCGCG CGAGGAGGTG CTGGTGGCGG TGCTCACGCG CTTCATGGAA ACGCTCGACA CCGATCCGGT GCCGGGAGAG CGGTGGGACG ACACGCTGCG GCGCACGATG ACCTCCATCC ATCGGGAGTA CTGCGCGCAT CCGCACATGA ACGATATCGA CCTCGATCCG AACATCTCTT ACGCGGGTTT GGCGGCCCAC ACCGAGAAGA TCGTGTCGCT GCATCTCGAC CAGGGTATGC CCGAGCCCGT GCTCACGAAG GCGTGGGCCA TGGTGGACGC CTTTCTCACC GGGTTCAACG GAAGCGCGAT CGCCGCCCAG AAGCGACGGC TGGCAGACGA GGCGGCGGGT GGCGCGACGC GCGACATGCC CGTGTGGCAG CGCATCGTGG ATTCGGCGTA CTCGGAAGAG TCGTTCGCGA ACGGCGTGGA GATGATCATC ATGGGTGTGC GTGGCTTGGC GGCACCCGAC CCGTGCGAGT GGCATACCCC GAAATAA
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Protein sequence | MDAETEKKRK SGLTRDVIVD TAYRMIDRDG MGAFTMRALG AELGVSAMAF YAHFSSREEV LVAVLTRFME TLDTDPVPGE RWDDTLRRTM TSIHREYCAH PHMNDIDLDP NISYAGLAAH TEKIVSLHLD QGMPEPVLTK AWAMVDAFLT GFNGSAIAAQ KRRLADEAAG GATRDMPVWQ RIVDSAYSEE SFANGVEMII MGVRGLAAPD PCEWHTPK
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