Gene Elen_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0628 
Symbol 
ID8414918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp802075 
End bp802731 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID645023605 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003181002 
Protein GI257790396 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.504351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCGG AAACCGAAAA GAAGCGGAAG AGCGGGCTGA CCCGGGACGT CATCGTGGAT 
ACCGCGTATC GCATGATCGA TCGCGACGGC ATGGGCGCAT TCACGATGCG TGCCCTCGGC
GCGGAGCTGG GCGTGTCGGC CATGGCGTTC TACGCGCACT TTTCCTCGCG CGAGGAGGTG
CTGGTGGCGG TGCTCACGCG CTTCATGGAA ACGCTCGACA CCGATCCGGT GCCGGGAGAG
CGGTGGGACG ACACGCTGCG GCGCACGATG ACCTCCATCC ATCGGGAGTA CTGCGCGCAT
CCGCACATGA ACGATATCGA CCTCGATCCG AACATCTCTT ACGCGGGTTT GGCGGCCCAC
ACCGAGAAGA TCGTGTCGCT GCATCTCGAC CAGGGTATGC CCGAGCCCGT GCTCACGAAG
GCGTGGGCCA TGGTGGACGC CTTTCTCACC GGGTTCAACG GAAGCGCGAT CGCCGCCCAG
AAGCGACGGC TGGCAGACGA GGCGGCGGGT GGCGCGACGC GCGACATGCC CGTGTGGCAG
CGCATCGTGG ATTCGGCGTA CTCGGAAGAG TCGTTCGCGA ACGGCGTGGA GATGATCATC
ATGGGTGTGC GTGGCTTGGC GGCACCCGAC CCGTGCGAGT GGCATACCCC GAAATAA
 
Protein sequence
MDAETEKKRK SGLTRDVIVD TAYRMIDRDG MGAFTMRALG AELGVSAMAF YAHFSSREEV 
LVAVLTRFME TLDTDPVPGE RWDDTLRRTM TSIHREYCAH PHMNDIDLDP NISYAGLAAH
TEKIVSLHLD QGMPEPVLTK AWAMVDAFLT GFNGSAIAAQ KRRLADEAAG GATRDMPVWQ
RIVDSAYSEE SFANGVEMII MGVRGLAAPD PCEWHTPK