| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0613 |
|---|
| Symbol | |
|---|
| ID | 8414903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 781150 |
|---|
| End bp | 781827 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645023590 |
|---|
| Product | cytoplasmic chaperone TorD family protein |
|---|
| Protein accession | YP_003180987 |
|---|
| Protein GI | 257790381 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000298051 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACG AGGGAATGCG CGCCTTGGCC GAGGCGCTCC GGCAGCAGAG TGCGGCGTAC
GGGTTCGTGG CGCGTTTGTT GCGCACCGAG GTGGATGACG AGGCTCTCGG GAGGCTGCGC
GCGATGAGGT TTCCTGCCGC GAGCGGCAAC GATCATCTCG ATGCGGGCTA TCGAGGGTTG
TGCGCTTATC TGAACGCAGG CGGAGAGCGC CAGCACGGCG ATTTGGCCGT GGACTTCCTG
CATACGTTCA TCGGCGTGAC GCAGGATCGA GAGCAGGTGG CTTTTCCGTA CGAGTCGGTA
TACACCTCGC CTGAGCATCT GCTGATGCAG GATGCACGCG ACGAAGTGCT GGCGGCGTAC
CGTGCGGCGA AGGTGGTGTT GGTGGACGAA GCGTGCGAGC CCGAGGATCA TCTGGCGTTC
GAGTTGGAGT TCATGCAGCT GTTGGGAGAG CGCGCCGCCG AGGCGCTGGA AGCGGGGGAC
GATGGATCGT GCGCGAACCT TTTGGAGGCT CGCCGTGCGT TTCTCGAGGA GCATCTGCTG
AACTGGGTTC CCGATTTCGC CGACGACGTG CAACGCGTTG CACGCACGGG ATTCTATCGG
GCGTTGGCCG ACATCGTGTT AGGGGTGCTT GAAACGGATC AAGCGTTCCT GGAAGACGTG
CTGGACGATG CCGCGTAG
|
|---|
| Protein sequence | MIDEGMRALA EALRQQSAAY GFVARLLRTE VDDEALGRLR AMRFPAASGN DHLDAGYRGL
CAYLNAGGER QHGDLAVDFL HTFIGVTQDR EQVAFPYESV YTSPEHLLMQ DARDEVLAAY
RAAKVVLVDE ACEPEDHLAF ELEFMQLLGE RAAEALEAGD DGSCANLLEA RRAFLEEHLL
NWVPDFADDV QRVARTGFYR ALADIVLGVL ETDQAFLEDV LDDAA
|
|---|
| |