| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0519 |
|---|
| Symbol | |
|---|
| ID | 8414803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 670332 |
|---|
| End bp | 672155 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645023490 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
|---|
| Protein accession | YP_003180893 |
|---|
| Protein GI | 257790287 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.220754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAG AGAAGAAGCA GGGCCTTTCG CGTCGAGCGT TCTTGGGTCT GGGCGGCACC
GCGCTCGCGG GTGCGGCCGT CGCCGGGCTG GCGGGCTGCG CGCCGCAGGG TTCCGCCGAC
GCGGGCAAGG CCTCGACGGC GGGCGCGGCG GATGGCGCGA CGGGCGGCAT GCCCGTGGCC
GACAGCGGCG CTTCGGCCGG TCCCGACGTG GCCGGCATGC ACAGCTGGGA GATCGCGCCC
GAGGACATCC CCGCGGACAA GATCACGAAC ACCGAGGACT GCGACGTGCT CGTCGTGGGC
GCGGGCCTCG GCGGCTGCTG CGCCACCATC GCCGCGCTCG AGGAGGGCGC GAAGAAGGTC
ATCACCATCG ACAAGAACCC CGAGACGGTG GTCGCGCGCG GCGTGCACAT CGCCGGCTTC
CACACGAAGG TGCAGCAGGG TCTCGTGGAC CAGGGCCTCG TCGAGGAGCC CGACTACAAC
AACGTCGTGC GCCGCTGGAT CAACTGGGCG CAGGGCCGCG TGAAGGAGCC GCTGCTGTGG
GAGTTCGCGC ACAAGAGCGG CGCATGCTTC GACTGGCTGT ACGACCTGGC CACCAAGAAG
GGACTCGAGG CGCTGCTGTG GGACGGCTAC TACAAGGGTC CCGACTACAC CGAGTACCCG
GTCACGCACA TCTTCTACCA GGCCGACAAG TACGAGGAAA CCATCAACTT CACCTTTTAC
CAGGGCTCGG GCGTGGGCGA CGTGTACGGC AACGCGGTGC TCGTGCCGGC GCTGTACGAC
ACCATCGAGG AGCTGGGCGG CGAGATCCGC TGGGAGACGA AGAGCGAGCG CCTCGTCCGC
GACGGCGACG GCCCGGTGAC CGGCGCCATC GTGGCCACCG GCAAGAACGA GTACACGCAG
ATCAACGCGA AGTCGGTCAT CATCGCCTCG GGCGACTACG CCGCCGACGA CGAGATGTTC
CAGTACTACT CGCCCATGAC CGCCTACGCT ATGGACGGCC GCTTCTACAA TCCGCCCGAC
GTCGACACCG GCGACATGCA CAAGCAGGCC CTGTGGGCCG GCGCGGCCAT GCAGAAGTCC
GAGCCGCATT CGGCCGTCAT GCACCTCGAC TTCGGCGCGG CAAGCTACGG CTTCCTGCAC
GTGAACTGGG ACGGCAAGCG CTTCAAGAAC GAGGACGTGA ACACCCAGTC GAAGAGCGTG
ACGAAGGCGC TGCAGACGCA GAAGGACGCC TGGACCATCT ACGACTCCCA TGGCCTCGAG
CAGGTGAAGG CCCAGATGGA CGCCGGCCTC GGCGGCGGTT TGCAGTGGGG TCAGCTCACG
CAGCCCGTGG GCGGCGAGTA CAACCTGGAG GCGCAGCAGA TCGTCCTCGA GGGCGAGGTC
GAGAGCGGCC AGACGCTGAA GGCCGATTCG CTGAAGCAGC TCGCCGAGAA GATGGGCGTG
CCGCCCGAGA ACCTCGAGGC CACGGTCGCC CGCTACAACG AGCTGTGCGA TCTGGGCAAG
GACCTCGACT ACGGCAAGCG CCCCGAGGTC ATGGGCAAGG TGCAGGATCC GCCGTTCTAC
GCCGGCAAGC TGGTGGCCAG CCTGCTCACC ATGTGCGGCG GCCTGCGCAC GAACACCGAC
TGCCAGGTGC TCGACGCCGA GGATCAGCCG ATCGAGGGCC TGTACGTGTG CGGCTCGGCC
GCCGGCGAGT TCTTCGGCGC GGGCGACTAT CCCACCTACG TGCCGGGTAT CGGCCACGGC
CGCTGCGTGA CCTTCGGCCG CATCGCCGGC ATCAACGCCG CCGGCGGCGA CGCCGAGTCG
AAGATCCCCA GCCTCGACAT CTAA
|
|---|
| Protein sequence | MEEEKKQGLS RRAFLGLGGT ALAGAAVAGL AGCAPQGSAD AGKASTAGAA DGATGGMPVA
DSGASAGPDV AGMHSWEIAP EDIPADKITN TEDCDVLVVG AGLGGCCATI AALEEGAKKV
ITIDKNPETV VARGVHIAGF HTKVQQGLVD QGLVEEPDYN NVVRRWINWA QGRVKEPLLW
EFAHKSGACF DWLYDLATKK GLEALLWDGY YKGPDYTEYP VTHIFYQADK YEETINFTFY
QGSGVGDVYG NAVLVPALYD TIEELGGEIR WETKSERLVR DGDGPVTGAI VATGKNEYTQ
INAKSVIIAS GDYAADDEMF QYYSPMTAYA MDGRFYNPPD VDTGDMHKQA LWAGAAMQKS
EPHSAVMHLD FGAASYGFLH VNWDGKRFKN EDVNTQSKSV TKALQTQKDA WTIYDSHGLE
QVKAQMDAGL GGGLQWGQLT QPVGGEYNLE AQQIVLEGEV ESGQTLKADS LKQLAEKMGV
PPENLEATVA RYNELCDLGK DLDYGKRPEV MGKVQDPPFY AGKLVASLLT MCGGLRTNTD
CQVLDAEDQP IEGLYVCGSA AGEFFGAGDY PTYVPGIGHG RCVTFGRIAG INAAGGDAES
KIPSLDI
|
|---|
| |