Gene Elen_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0516 
Symbol 
ID8414800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp666486 
End bp667169 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content61% 
IMG OID645023487 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003180890 
Protein GI257790284 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.149868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTT ATGCGATTCT GACCGATCTC AACAAATGCG TCGGCTGCCT TGCGTGCTCG 
ATAGCGTGCA AGGTGGTGAA CAGCGTGCCG GTGGGGTCGT ATTGGAACAA GGTCTTGCGC
ATCGGACCGA ACCCGCGCAC CAAGGGCGGC CAATGGCCCG ACGTGTACAC CTATTTCCTC
ACCGTGCAGT GCCAACACTG CGAGAATCCC GAGTGCGTGA AGGTGTGCCC GACCGGCGCC
TCTCACAAGC TGGAGGACGG CACCGTGCAG ATCGACAAGT CGAAGTGCAT CGGCTGCCAG
TTCTGCGCGA TGTCGTGCCC GTACAGCGTT CGCTACTTGA ACGAGGAGGA GGGCGTCGTG
GAGAAGTGCA CGCTGTGCGA GCAGAAGATC GCCCAGGGCG AGCTGCCGCA ATGCGTGAGC
GAATGCGGCG GTCGCGCTCG GTTCTTCGGC GATTTGGACC AGGGGCTCGA GAGCTTTGAG
GCGCCGGGGT GCGATCTGCA GGACCCGTCG TACGATGCGC AGGCGAAGGC CAGGATGAAG
TGGGGCGATT TGATAGGCGA CTCATGCGAC TATCCGGTGA AGCCTTACGA CGAGAACGAA
GTGTACCACC TTCCCGACGT GGGCAACGCC CCCAGCTTCG TCTACATCCT GCGAAACGAG
AAGTGGCAAG GAGGCGGTGA ATGA
 
Protein sequence
MARYAILTDL NKCVGCLACS IACKVVNSVP VGSYWNKVLR IGPNPRTKGG QWPDVYTYFL 
TVQCQHCENP ECVKVCPTGA SHKLEDGTVQ IDKSKCIGCQ FCAMSCPYSV RYLNEEEGVV
EKCTLCEQKI AQGELPQCVS ECGGRARFFG DLDQGLESFE APGCDLQDPS YDAQAKARMK
WGDLIGDSCD YPVKPYDENE VYHLPDVGNA PSFVYILRNE KWQGGGE