Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0422 |
Symbol | |
ID | 8414706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 541107 |
End bp | 543527 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645023397 |
Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
Protein accession | YP_003180800 |
Protein GI | 257790194 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0580651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000000000595111 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGAAAA CGAAAGAGCA TGCCGTTTCT CGCCGCACGT TCGTGAAAGG CTCGGCCCTG GCCGGCCTGG GCGCCGCCGC ACTGGGCACC GGCACGCTGT TCGCGTGCTC GCCGCAAGGA ACCGATGAAG TTTCTGGCGG GGCATCGGAG ACGGTCGACG AGAAGGTGGT TTGGGGCCAT TGTTCCGTCA ACTGCGAAGG TCGCTGCGCG CTGCGCCTGC ATGTGACGAA CGACGAAGTT GCGTGGGTGG AGAGCGACAA CACGGGCGAT GACGTGTACG GCGATCATCA GATTCGCGCA TGTCTGCGCG GTCGTTCCAT CCGGCGTTGG ATTAATCATC CCGACCGCTT GTCTTACCCT ATGAAGCGCG TCGGCAAACG CGGCGAAGGC AAGTTCGAGC AGATTTCCTG GGACGAGGCC TACGACCTCA TTGCCGATAA CTATCAGCGT ATCCTCGACG AATACGGTCC TGAAGCCATC TGGAATCACT ATGCTTCGGG CGTCAACGCC AGCAACATCG GGTCGTTCCT TTCTCGTTTC ATCAACATGA ACGGCGGATG CCTGGGGCGC TACGGCAGCT ACAGCTCGGC TCAGATATCC GCCGCCCTTC CGTATCTGTA CGGCAAGCGT GCCGCCAACT CGAACTCCGA CATCGTGAAC GCGAAGCTCG TCGTGATGTT CGGCGAGAAC TCCGTCGAAA CGAAGGCTGG CGGTGCCGGG CCTACGTACC ACTTGGAACA GGCGCTCGAG CAGGGCGGTG CAAAGGTCAT CGTCATCGAT CCGCGCTACA GCGACACGGT GGCGACGCGG GCCGACCAGT GGATCCCCAT TCGTCCCGGC ACTGATGCGG CGCTCGTCGA TGCCGTAGCC CATACCCTCA TCGAGGAAGA TCTAGTGGAT CACGACTTTC TGGCCACCTA CTGCATCGGT TACGACGAGG ATACCATGCC GGAATCGGCG CAGGGGCAGA ACAAGTCGTA CAAAGCCTAC ATCATGGGTC AAGGCGTAGA CGGCGTCGAG AAAACGCCCG CATGGGCCGA AGGTATTACG GGGATTCCCG CCGATACCAT TGTCGAGCTG GCACGCGAGA TCGGCACTGC GAAACCCTGC GCCATCTACC AAGGCAAGGG TCCGCAGCGC CAATCGAATG GCGAGCAGAC GGCACGCGCC ATCTGCATGC TGCCGGTTCT CACGGGCAAC GTAGGCATCA ACGGCGGCAA CACGGGTTCC GACCTTGACG GATTCTATTT CTCGTCGTTC TCGGTGCCGT CGGACAAAAA CCCGGTGCAA ACGTCGATCG CTACCTTCAC CTGGACTGAT GCCATCGATC ACGGCACCGA GATGACGAAA CTCGCCCATG GCGTGCGCGG CAAGGACAAG CTCGATGTGC CCATCAAGAT GATCTTCAAC TACGCGGGCA ACACGATCAC GAACCAGCAC AGCGACATCA ATCGCACGCA CGAGATCCTG CAAGACGAAA GCAAGTGCGA GTTCATCGTG GTGTGGGAAA CGTTCATGAC CGATTCCGCC AAGTACGCCG ACGTGCTGCT GCCCGATCTT ATGCCGGTCG AGCAGCCGAA CTTCGTCTCG AACGACTATG CCGGCAACAT GGGCTTTATC ATCATGGGCG AGCCGGTCAC CTCGCCGAAG TTCGAACGGC GCACGCTGTA CGCCGATCTG CGTGAAATCG CCAAGCGCAT GGGCAAGGAG GAAGCGTTCA CCGAGGGCCG CGATGAGGAG GCTTGGCTTC AGTTCTGCTA CGAGGAAGCT CGCAAGGAGG ACGCAGATCT TCCAACGTAC GACGAGATGA AGGAAATGGG CGTTTATCGT CGTAAGGATC CGGACGGTCA TCAGGTTGCG CTCAAGGATT TCCGCGATGA TCCGGTAGCG AACCCGCTCA AAACCCCATC GGGCAAGATC GAGATATACT CCGAGCAGTT GGCGGAGATC GCCGAAACAT GGGAGCTGGC CAAAGGCGAC ATCATCGACC CGTTGCCCGT ATACGCGCCG GGCGTAGAGG GTTGGGACGA TCCGCTTCGC GAAACGTATC CTCTCCAGAT GCCAGGCTAT CACTATAAGG CGCGTGCTCA TTCGTCTTAC GGCTGCATCG ACGTGCTCAA GCAGGCGAAC CCGCAAGAGC TGTGGATGAA CCCGCTGGAC GCCAGCGAGC GCAGCATTAA AGATGGCGAC AAGGTTCAAG TGTTCAATGA TCGCGGTACC GTCGAGATCG TGGCGAAGGT CACGCCGCGC ATCATGCCCG GCGTGGTGTC GATGGGCCAG GGAGCTTGGC ACGACGCCGA CATGTCCGGA AACAAGGTGG ACAAGGGCGG CTGCATCAAC ACGCTGACCT CTCCTCGCCC GACGCCTTTG GCGAAGGCTA ACCCGCAACA CACGAACCTC GTCGAAGTCA AGAAGGCCTA G
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Protein sequence | MTKTKEHAVS RRTFVKGSAL AGLGAAALGT GTLFACSPQG TDEVSGGASE TVDEKVVWGH CSVNCEGRCA LRLHVTNDEV AWVESDNTGD DVYGDHQIRA CLRGRSIRRW INHPDRLSYP MKRVGKRGEG KFEQISWDEA YDLIADNYQR ILDEYGPEAI WNHYASGVNA SNIGSFLSRF INMNGGCLGR YGSYSSAQIS AALPYLYGKR AANSNSDIVN AKLVVMFGEN SVETKAGGAG PTYHLEQALE QGGAKVIVID PRYSDTVATR ADQWIPIRPG TDAALVDAVA HTLIEEDLVD HDFLATYCIG YDEDTMPESA QGQNKSYKAY IMGQGVDGVE KTPAWAEGIT GIPADTIVEL AREIGTAKPC AIYQGKGPQR QSNGEQTARA ICMLPVLTGN VGINGGNTGS DLDGFYFSSF SVPSDKNPVQ TSIATFTWTD AIDHGTEMTK LAHGVRGKDK LDVPIKMIFN YAGNTITNQH SDINRTHEIL QDESKCEFIV VWETFMTDSA KYADVLLPDL MPVEQPNFVS NDYAGNMGFI IMGEPVTSPK FERRTLYADL REIAKRMGKE EAFTEGRDEE AWLQFCYEEA RKEDADLPTY DEMKEMGVYR RKDPDGHQVA LKDFRDDPVA NPLKTPSGKI EIYSEQLAEI AETWELAKGD IIDPLPVYAP GVEGWDDPLR ETYPLQMPGY HYKARAHSSY GCIDVLKQAN PQELWMNPLD ASERSIKDGD KVQVFNDRGT VEIVAKVTPR IMPGVVSMGQ GAWHDADMSG NKVDKGGCIN TLTSPRPTPL AKANPQHTNL VEVKKA
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