Gene Elen_0420 details

Gene Information

• Locus tag: Elen_0420
• ID: 8414704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Eggerthella lenta DSM 2243
• Kingdom: Bacteria
• Replicon accession: NC_013204
• Strand: +
• Start bp: 538548
• End bp: 539318
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 645023395
• Product: Sigma 54 interacting domain protein
• Protein accession: YP_003180798
• Protein GI: 257790192

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.482221
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.00000000444623
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGACGGATC TCGAAAGCTA TTCGGATAGA GAATTTCTTG CAGCGCTTAA GCCGCTTATC 
GGTACTCTTG TTATCGACAA ACGGCTAGCT CCGTCAGATA ACCCGCGTGC GGTTTTGCTA 
GGAGGCCAGA GCGGTGCGGG CAAAACAACG CTGCACGATG TCTTTCTCGC ACTTGAGGAA 
AGCAATGCTA TTGTGATTAA CGGTGATGAC TACCGCTCCG TCCACCCGCG GTTTCGTCAG 
ATCTGCGCCC AATACGGCAT CGACTCGCCT GCACATACGG CGGCGTGGGC CGGTCGGATG 
GTCGAGGCGA TTGTCGATGC GCTCTCCATC ATGGGATACA ACCTCATTAT CGAAGGGACG 
TTGCGCACGT CCGAAGTCCC CCTGAAGACT GCGCGGCTCC TACGTGATCG CGGGTATAGC 
GTATCGCTGG CGCTCATGGC GGTTAAGCCG GAGATATCGC TCATCAGCTG CCAGTTGCGA 
TACGAGCAGA TGCGCATCGC CGGAACGGAG CCGCGCGCGG TCGATCCTGC CCATCACCTT 
TCCATCGTCA AGAGCATCGT CGGCAACTTG AAGGTGCTGG AAGAGTCGGG CATGTTCGAC 
GATATCGGCC TGTACTCGCG CAGCGAGCAG CGCCTCTTCT CTAGCGCGGA CGATGGTGGG 
CAAGCGAGCG AAGCGCTCGA GCGGATCCTC TTCGGAGCAT GGACCGCCGA AGAAAGCGCT 
CACTACGAAT ATCTCAAGCA ACGCCTCGAA CAAGCAAGAG CCCTCGGCTA G 

 

Protein sequence

MTDLESYSDR EFLAALKPLI GTLVIDKRLA PSDNPRAVLL GGQSGAGKTT LHDVFLALEE 
SNAIVINGDD YRSVHPRFRQ ICAQYGIDSP AHTAAWAGRM VEAIVDALSI MGYNLIIEGT 
LRTSEVPLKT ARLLRDRGYS VSLALMAVKP EISLISCQLR YEQMRIAGTE PRAVDPAHHL 
SIVKSIVGNL KVLEESGMFD DIGLYSRSEQ RLFSSADDGG QASEALERIL FGAWTAEESA 
HYEYLKQRLE QARALG