| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0317 |
|---|
| Symbol | |
|---|
| ID | 8414601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 413299 |
|---|
| End bp | 415044 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645023294 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003180697 |
|---|
| Protein GI | 257790091 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCGC TCATCAAACG CGTGCTCGAC CTGGCTGGCA GCTTCTCTCC GGCGGCGCGG
CGCAGCCTGA CGTGGGGCAT GGTGTGCAAC ATCCTGAAAG CGTTCTTCAT GGCCGGTATG
CTGGGCGCGG TGTTCTGGGC GCTCGAGAAC CGCGACCACC TCGACGCCGT CGTGGCGCTG
CAATGCCTGG GCATCTTGGC TGTCAGCGTG ATCGGGCAGT ACGTGTTCCA GTACCTCGTG
GACATCACGA TGGACGCGCA GGGCTTCCAC ATCTTCCGCG ACCTGCGCCT GCGCGTGGGC
GACCGGCTGA AGGCCGCGCC CATGGGCTAC TTCTCCGAGC AGCGCCTGTC GGCCGTCACC
ACGACGCTGA CCACGACGGT GCACCAGCTG GAGGAGTTCA TGACCATCTG CCTGACGGGT
CTGACGGGCG GCGTGGCCAT GGCGGTGATC ATGAGCCTGT TCTTCCTCGC CGTGGCCTGG
CCCATCGCGG CCATCACGTT CGCGGGCATC GCCGCGGGCC TGTGCGTGCT GAACGTGCTG
CGCCGCCGCG CCACCAGCGT GACGCGCGAG GTGACCGCCG CGCAGGAGGC CATGGCTGAC
AAGGTGATCG AGTACGCTCG CGGCATGGCC GTGCTGCGCA CGTTCGCCAC GCCCGACGAA
TCGCTGGCCG CCGCGAAGGC GTCGTTCCAG CAGAAGCGCG CGGCCGATTA CCATCAGGAG
GCCGCCGCGC AGGGCATCCT CAAGCTGTAC GCGCTCGTGT TCAACCTGGC CAGCTGCGCG
GTGCTGTTCA CCGCGTGCGC GCTGTACCTG AACGGCGCGC TGCCGCTGTC GTGGGCGCTC
ACGCTGCTCG TGGCCGCGTT CATGATCTAC GGCGAGCTCA TCCACGCGAA CGATGCGGCG
TTCCTCACGA AGAAGATCGA AGGCGAGCTC GACCGCGTCG ACGAGGTGTG CGACATCCCG
AAGCAGAACG CGACGGACGC GCCGCTCGCG CCCGCCGATT TCGGCATCGA GATGAACGGC
GTCTCGTTCG GTTACGACGC CGACCGGCGC GTCATCGACG ACGTGTCGCT GCGCATCCCG
CAGGGCACGA GCTGCGCCAT CGTGGGGCCC AGCGGCTCGG GCAAGACGAC GCTCGTGAAC
CTCATGGCCC GATTCTGGGA CGTGGACGCC GGCGCGGTGC TGCTCGGGGG CCAGGACGTG
CGCAAGGGCA CGGCCGAGAG CCTGCTCGCG CACGTGTCGA TGGTGTTCCA GAACGTGTAT
CTGTTCAACG ACACCGTGGA GAACAACATC AAGTTCGGCA TGCCGAACGC CACCCATGCC
GACGTGGAGG CCGCCGCCAG GCGCGCCCGC TGCCACGAGT TCATCATGCA GCTGCCGCAG
GGCTACGACA CGGTGCTCGA GGAGGGCGGC GCCAGCCTCT CGGGCGGGGA GCGCCAGCGC
ATCTCCATCG CGCGCGCCAT CATGAAGGAT GCGCCCATCG TCATCTTGGA CGAGGCCACG
AGCTCGGTCG ATCCTGAGAA CGAGCACGAG CTGATCGCCG CCATCGGCGA GCTCACGCGC
GGCAAGACCC TCGTGTCCAT CGCGCACCGC CTGAACACGG TGGCCGGCGC CGATCAGATC
CTCGTGGTGG ACGAGGGCCG CATCGTGCAG CGGGGCACGC ACGACCAGCT CATGGGCGAG
CAGGGGCTCT ACCGCGACTT CGTGAACCTG CGACGCGAAG CCGCCGGCTG GCGCCTGGCG
GGGTAG
|
|---|
| Protein sequence | MFALIKRVLD LAGSFSPAAR RSLTWGMVCN ILKAFFMAGM LGAVFWALEN RDHLDAVVAL
QCLGILAVSV IGQYVFQYLV DITMDAQGFH IFRDLRLRVG DRLKAAPMGY FSEQRLSAVT
TTLTTTVHQL EEFMTICLTG LTGGVAMAVI MSLFFLAVAW PIAAITFAGI AAGLCVLNVL
RRRATSVTRE VTAAQEAMAD KVIEYARGMA VLRTFATPDE SLAAAKASFQ QKRAADYHQE
AAAQGILKLY ALVFNLASCA VLFTACALYL NGALPLSWAL TLLVAAFMIY GELIHANDAA
FLTKKIEGEL DRVDEVCDIP KQNATDAPLA PADFGIEMNG VSFGYDADRR VIDDVSLRIP
QGTSCAIVGP SGSGKTTLVN LMARFWDVDA GAVLLGGQDV RKGTAESLLA HVSMVFQNVY
LFNDTVENNI KFGMPNATHA DVEAAARRAR CHEFIMQLPQ GYDTVLEEGG ASLSGGERQR
ISIARAIMKD APIVILDEAT SSVDPENEHE LIAAIGELTR GKTLVSIAHR LNTVAGADQI
LVVDEGRIVQ RGTHDQLMGE QGLYRDFVNL RREAAGWRLA G
|
|---|
| |