| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0312 |
|---|
| Symbol | |
|---|
| ID | 8414596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 407735 |
|---|
| End bp | 408346 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645023289 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003180692 |
|---|
| Protein GI | 257790086 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.041978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGAAAT CCGACGCGAG CATCGACCCT CGCATCCTCG ACAGCGCACG GCGGGAGTTC
CTCGCCCGCG GCTTCGAGGG AGCGTCCTTG CAGAGCATCT GCGCGGACGC CGGCGTGACG
ACGGGTGCGC TCTACAAACG CTACAAGGGG AAGGCCGATC TGTTCGAAGC CGTGGTAGCT
CCCACGCTCG CCGACATCCG CGCGCTTGAG GAAGAGGCGA AGCGCCGCGA TTACGCGCTC
ATGGACGATA AGAACCTTCG CGAGCTGTGG GCTCTGTCCG AAGATATCCA TCGCCAGTGG
ATGATCTACT TCTACGAGCG CTACGAAGGG ATGCGGCTCC TGTTGTGCTG TGCAGAGGGC
ACGGCCTATG CGAACTTCCT TCACGACTTC GTGGCGCGCA ACACGGCGTT GTGCATGGAG
TTCGTGAACG AGGCGCGTCG GCGCGATTTG CCGGTGAGCG ACATCGACGC CGACGAGTTG
CACATCCTGC TCACGGCGTA CTGGTCCACC GTGTTCGAGC CCCTCGTCCA CGGGTTCCCC
CTGGAAAAGG CGCTCGGATA CTGCAAGCGC ATCGCCGGGT TCTTCAATTG GCAGGTGGTG
TTCGGCTTCT AA
|
|---|
| Protein sequence | MSKSDASIDP RILDSARREF LARGFEGASL QSICADAGVT TGALYKRYKG KADLFEAVVA
PTLADIRALE EEAKRRDYAL MDDKNLRELW ALSEDIHRQW MIYFYERYEG MRLLLCCAEG
TAYANFLHDF VARNTALCME FVNEARRRDL PVSDIDADEL HILLTAYWST VFEPLVHGFP
LEKALGYCKR IAGFFNWQVV FGF
|
|---|
| |