Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0279 |
Symbol | |
ID | 8414563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 372506 |
End bp | 373861 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645023256 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003180659 |
Protein GI | 257790053 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTTC CCGCAGCCGA CTTGAGCAAA CAACCGGACA ACCGCACCAC CATGGAGCTG GGCGCGGTGC TTCCCTTGAC CGCCGAGGTG AAGGACGACC ACCTGTATGT GGGCGGCGTC GATATGGTGG AGCTGGCGCG CGAGCAGGGC ACGGCGCTGT ACGTCATGGA CGAGGCGGAC ATGCGCACGC GCATGGAAAC CTACCTCGCG GCGTTCCGCA GCCGCTATCA GAACTCCGAT GTCGTGTACG CCAGCAAGGC GTTCCTCAAC AAGGAGGCCG CGCGCATCGT AGCCGACGAG GGGCTGTGCC TCGACGTGTC AGGCGGCGGC GAGCTGGCCA TCGCGTTGGC CGCGGGCTTC CCGACCGAGC GCATCTTCAT GCACGGCAAC AATAAAACGC CGCGCGAGCT GCGCGAAGCC ATCCAGGCGG GCGTTGGCCG CATCATCATC GACAGCCGCA TCGAGCTCAA GCGCATCTCC GAGATCGCGG GCGAGCTGGG CGTCGTGCAG CCTATTTACA TGCGCATCAC GCCGGGTGTC GAGGCCGACA CCCATCAGTA CATCCGCACG GGTTGCGAGG ACTCGAAGTT CGGCTTCACC ATGCGCGACG ACTTCGCCTA CGGGTGCGTG AAGGACGTGC TGGCGGCCCC GAACGTGAGG CTGGCGGGTC TGCACTGCCA CATCGGCTCG CAGATATTCG CGCTGCATTC CTACCCTGAG GCCGTCGAGG TCATGGTGGA GCTTATGGCG CGCATCGAGG AAGGGTACGG CTATCGTATA GAGGAGCTGG ACGTGGGCGG CGGCCTGGGC ATCGCCTACA CGGCCGACGA CAAGCCGGCT TCCATCGACG AGTTCGCCGA AACGGTCACG TCGGCGGTGC ACGCGGCGTG CGAGAAGTTC GGCGTGCCCG AGCCGCGCCT GCTCACCGAG CCGGGCCGCA GCCTGGTGGC CACGGCGGGC GTGACGCTGT ACACGGTGGG CATTCTGAAA ACGCTGCCGG GCATCCGCAA GTACGTGGCG GTGGACGGCG GCATGTCCGA CAACATCCGC ACGGCGCTGT ACCACGCCGA TTACGAGCCG GTCATCGCGA ACAAGGCGGG TCAGCCGCGC ACCGAGATCG TCACCATCGC GGGCAAGCAC TGCGAAAGCG GCGACGCCGT GGTCATCGAC ATGCCGATGC AGCACCCCGA CCTGGGCGAC ATCGTCGCCG TCTTCGGCAC GGGCGCGTAC TGCTACACTA TGGCCAGCAA CTACAACGGC CAGCCGCGGC CGGCCATCGT GTTCGTGAAG GACGGCCAGG CCCGCGTGAC CACGCGACGC GAAACGTACG AAGACCTGAT GAGCCGAGAC ATTTAG
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Protein sequence | MSLPAADLSK QPDNRTTMEL GAVLPLTAEV KDDHLYVGGV DMVELAREQG TALYVMDEAD MRTRMETYLA AFRSRYQNSD VVYASKAFLN KEAARIVADE GLCLDVSGGG ELAIALAAGF PTERIFMHGN NKTPRELREA IQAGVGRIII DSRIELKRIS EIAGELGVVQ PIYMRITPGV EADTHQYIRT GCEDSKFGFT MRDDFAYGCV KDVLAAPNVR LAGLHCHIGS QIFALHSYPE AVEVMVELMA RIEEGYGYRI EELDVGGGLG IAYTADDKPA SIDEFAETVT SAVHAACEKF GVPEPRLLTE PGRSLVATAG VTLYTVGILK TLPGIRKYVA VDGGMSDNIR TALYHADYEP VIANKAGQPR TEIVTIAGKH CESGDAVVID MPMQHPDLGD IVAVFGTGAY CYTMASNYNG QPRPAIVFVK DGQARVTTRR ETYEDLMSRD I
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