| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0240 |
|---|
| Symbol | |
|---|
| ID | 8414524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 328940 |
|---|
| End bp | 330409 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645023218 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_003180621 |
|---|
| Protein GI | 257790015 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCT TCTCCGATCC TGTGCTTCTG GCGCGTTTGC AGTTCGCTTG CACGGCGGCG
TATCACTTCA TTTTCGTGCC GTTGACCATC GGTTTGGGAC TTATCCTTGC CATCAACGAA
ACACGGTACT ACCGTTCCCG CGACCCGAAG GACGCGGCTG CCACCAAGTT CTGGGTGAAG
ATCTTCACCG CGACGTTCGT GTTAGGCTTG GCCACGGGCA TCACGATGGA GTTCTCCTTC
GGAACGAACT GGGCGGATTA CTCGAGGTTC GTCGGCGACA TCTTCGGTGC GCCGCTGGCC
GCCGAGGCGC TGCTCGCGTT CTTCCTGGAG TCCACGTTCT TGGGCGTGCT GCTGTTCGGG
CGCAAGCGCG TGTCGCCGAA GTTCTACATG GTGTCGGCCT GGCTCGTGTG GTTCGGCTCG
GCTCTGTCGG CCCTGTGGAT CCTCATCGCG AACTCGTGGA TGCAGACCCC GGCCGGCGCG
GAGCTGTCCG CCGACGGCTC GAAGGCCGTC ATCACCGACT TCCTGACCGC GGCGATGAAC
CCGTCGGTAT GGCCGCGCTA CTCGCACACC ATCGTGGCCG TGCTCATCAT GGGCGCGTTC
GTGGCCATGG CCGTTTCCGC GTGGTACCTC ATCAAGAACC GCCACAAGGA ATTCGCCATG
AAGACGATGA AGCTGGGCGC CGTGGTGGGC ATCGTGGTCA GCTGCGTCAT GCTGGTCACG
GCTCATTCCT CCGCCGTCAC CGTCGCCGAG GAGCAGCCCA CGAAGCTTGC CATGATGGAG
GGCATGTACG ACTCCGAGGT GCCTCCTCTG TACGCGTTCG GGTGGGTTGA CGAGGAGAAC
CAGAAGGTCA TCACCCCGTT CTCCATCCCG GGTGGCACGA GCTTCCTTGC AACCGGCACC
TGGGACACCG AGTACGAGGG CCTCAACCAG CTGGCCGCTT CCGCCGAGTA CGGTGCTCTC
GATCCCGAAA CCGCGCCGGT GAACTTCGTG TTCCAGACGT ACCACCTCAT GGTTGCCATG
TACGGCCTCA TCATGCTCAC CGTTATCCTG GCGCTCGTAT TCACGCTGCG CGGCGGCAAG
ATCCAGAACA TGAAGTGGTT GCAGCGCCTG GTGCTCATCT CGCCGGTGTT CCCGCTCATC
GCCATTCAGG CGGGCTGGTT CACGGCCGAA GTCGGCCGCC AGCCGTGGGT GGTGTACCCG
TCCGCAACCA GCCCCGAAGG CGTCAGCCTG CTCACGAACG AGGGCGTCTC GCAGTCGGTG
TCCGCTCCCG AGCTGGTGAT CACGATGGTG CTGTTCCTGG TGGTGTACGC GTTCCTCATG
GTCGCGTGGG CTCGCACGAT GGGTCGCTTC ATCAAGGAAG GGCCGGTTGC AGAGCATGAG
CCTGCGTTGG AGGGCGCCGC TGCGGGCAAG ACCCCGAAGG GCAAAGCAGC CCCCTCGTTC
GGCGACGACC TCGCGAAGGA AGGTGAGTAG
|
|---|
| Protein sequence | MDIFSDPVLL ARLQFACTAA YHFIFVPLTI GLGLILAINE TRYYRSRDPK DAAATKFWVK
IFTATFVLGL ATGITMEFSF GTNWADYSRF VGDIFGAPLA AEALLAFFLE STFLGVLLFG
RKRVSPKFYM VSAWLVWFGS ALSALWILIA NSWMQTPAGA ELSADGSKAV ITDFLTAAMN
PSVWPRYSHT IVAVLIMGAF VAMAVSAWYL IKNRHKEFAM KTMKLGAVVG IVVSCVMLVT
AHSSAVTVAE EQPTKLAMME GMYDSEVPPL YAFGWVDEEN QKVITPFSIP GGTSFLATGT
WDTEYEGLNQ LAASAEYGAL DPETAPVNFV FQTYHLMVAM YGLIMLTVIL ALVFTLRGGK
IQNMKWLQRL VLISPVFPLI AIQAGWFTAE VGRQPWVVYP SATSPEGVSL LTNEGVSQSV
SAPELVITMV LFLVVYAFLM VAWARTMGRF IKEGPVAEHE PALEGAAAGK TPKGKAAPSF
GDDLAKEGE
|
|---|
| |