Gene Elen_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0196 
Symbol 
ID8414480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp277196 
End bp277939 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID645023176 
ProductABC-2 type transporter 
Protein accessionYP_003180579 
Protein GI257789973 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.168445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCT TTAGCACCCT GTTCCGAGTC GAGTTCCGCC TGTCGCTGCG CGACATGAAC 
ATGCCCATCT TCGCCGTGAT CATGCCTGTG GTGGTGATGT TGGTCGTCGG CATGATGTTC
GGCGATCAGC CTGCCTACGA GGGCGCGAGC TACACGTTCG TGGCGCAATC GGTGGGCGCG
GTGTCTGCCA TCGGCATCTG CGCCGGCGGC GCGATGGGCC TGCCGCTCGT GGTGTCGAAC
TACCGGCACC GCAAGATTCT CAAGCGCTAC TTCGTGACGC CCGTCAGCGT GCACACCATT
CTGGCGGTGC AGGTGGCCAT CTACACCGTG TACGCGCTGA TCTCGGCCGT GCTCGTGTTC
GGGGTGGCGG CGCTGTTCTT CGGCTACGCG TTCACCGGGT CGTGGCCGGC GTTCGTCGGG
TCGTACGTGT TGGTGCTGGC GGCTATGCTG GCGCTCGGCA TGATGGTGGG CGGCCTCGCG
CCGAACGAGA AAGTCGCGGG CGTGCTGGCA AGCCTCCTGT ACTTCCCCAT GCTGCTGCTG
TCGGGGACGA CGCTGCCCTA CGAGATGATG CCCACGGCCG TGCAGCGCGG GGCCGACCTG
CTGCCGCTCA CCCAGGGCGT GAAGCTGCTG AAAGCCACGT CGCTCGGACT GCCCGTCGAC
CAGGCCGTCG TGCCGGTGGC GATCATGGCG GTGTGGGCCG CGGTATGCAC CGTGATCGCC
GTGCGTTTCT TCAAGTGGGA GTAG
 
Protein sequence
MKAFSTLFRV EFRLSLRDMN MPIFAVIMPV VVMLVVGMMF GDQPAYEGAS YTFVAQSVGA 
VSAIGICAGG AMGLPLVVSN YRHRKILKRY FVTPVSVHTI LAVQVAIYTV YALISAVLVF
GVAALFFGYA FTGSWPAFVG SYVLVLAAML ALGMMVGGLA PNEKVAGVLA SLLYFPMLLL
SGTTLPYEMM PTAVQRGADL LPLTQGVKLL KATSLGLPVD QAVVPVAIMA VWAAVCTVIA
VRFFKWE