Gene Elen_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0177 
Symbol 
ID8414461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp245994 
End bp247163 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID645023157 
Producturea amidolyase related protein 
Protein accessionYP_003180560 
Protein GI257789954 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGG TCGTCAAAAA ACCCGGTGTG ATCACCACCA TCCAGGACGT GGGGCGCTTC 
GGCTATCAGG GCAGCGGCTT CTCCACGAAC GGCGTGATGG ATCATCGCGC GTTCGCCATC
GCGAACCTCC TGGTGGAGAA CGACCCCGGC GCACCCGTGC TGGAATTCGC GCTGGCGGGA
CCCACGGTGC GCTTCACCAC GAACACCTGC TTCGCCATCA CGGGCGGCGA CTTCGCGCCG
ACGCTGGACG GCGAACCCGT GCCCATGTAC GCGGCCGTCA TGGTGCGGCG CGGCTCCATC
CTGCGCTTCA AGGCGTCGCG CACCGGCTGC TACGGTTACT TGGCCATCGC GGGCAACAGC
GTGCGCGTGC CCGAAGTGAT GGGCAGTCGC TCGACGAACC TCAAGTGCGA GTTCGGCGGA
TGGAAGGGTC GCACGCTCAT CGTCGGCGAC TACCTGCCGT TTTCCACGAA GAGCGTGGAC
TTCCTGCCCA ACCTAGGGTC GCACCGCATC GACGGCGACA ACGAGTTCTA CGGCTTCGAC
CGCGACGAAA TCACCGTGCG CGTGGTGCCC GGGCCTCAGC AGGACATGTT CACCGACAAA
GGCCTGGCTA CGTTCTACGG GCAGGCGTAC ACCACCACCA CGAAATGCGA CCGCATGGGG
TACCGCCTGG ACGGACCGGA AATCGAGACG AAGCACGGGT CCGACATCAT CTCCGACGGC
GTGGCGTTCG GCGCCGTGCA GGTACCGTCG CACGGACGGC CCATCATCAT GCTGGCCGAC
CGGCAAACTA CCGGCGGTTA CGCGAAAATC GGCACCATCG CCAGCGTGGA CATCCCGAAG
CTGGTGCAAC GTCCGCCGGG CGGCAAGATC CGCTTCGAGT CCATCGGCGT GCAGGAGGCC
CAAGCGCTGC TGCGCGAAGA GGCGCACCTG TTCGAAATGC TGGCGTTGAA AGTGAGGCGG
CCCAGCGCCG ACGGCATATC GCCCCGGCGC ACGGCGCGGC GCCTGACCCC CATCCTGGAG
GAACAGGCAC GCAAGTCGCA GGCCGACATG TTGTGGATCG ACCGAGCCGA TCGCTCCCAG
CGCGTCGGCA ACCGCAACGC CCTGGGAACC GTCCCGCCAA AGAAACAACC GCCCGACGCA
ACCGACACCA CCGAACGCGC AACGACGTAG
 
Protein sequence
MGLVVKKPGV ITTIQDVGRF GYQGSGFSTN GVMDHRAFAI ANLLVENDPG APVLEFALAG 
PTVRFTTNTC FAITGGDFAP TLDGEPVPMY AAVMVRRGSI LRFKASRTGC YGYLAIAGNS
VRVPEVMGSR STNLKCEFGG WKGRTLIVGD YLPFSTKSVD FLPNLGSHRI DGDNEFYGFD
RDEITVRVVP GPQQDMFTDK GLATFYGQAY TTTTKCDRMG YRLDGPEIET KHGSDIISDG
VAFGAVQVPS HGRPIIMLAD RQTTGGYAKI GTIASVDIPK LVQRPPGGKI RFESIGVQEA
QALLREEAHL FEMLALKVRR PSADGISPRR TARRLTPILE EQARKSQADM LWIDRADRSQ
RVGNRNALGT VPPKKQPPDA TDTTERATT