Gene Elen_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0173 
Symbol 
ID8414457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp241684 
End bp242448 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID645023153 
ProductLamB/YcsF family protein 
Protein accessionYP_003180556 
Protein GI257789950 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGCA TCGACTTGAA CAGCGACCTG GGCGAGAGCT TCGGGCGCTA CACGCTGGGG 
CTCGACGACC AGATCATCCC GCTTGTGTCC AGCGCGAACA TCGCGTGCGG GCAGCATGCG
GGCGATCCGG TGGTCATGCG CAAGACGGTG GGCATGGCGA AGGACGCCGG CATCGCCATC
GGCGCGCATC CGGGCTATCC CGATCTGCAG GGCTTCGGGC GCCGCGACAT GCACCTGTCG
CCCGACGAGG CGTACTCCTA CATGCTGTAC CAGATCGGCG CGCTGCAGGC GTTCTGCTCG
GCGCAGGGCG TGCAGCTCGC GCACGTGAAG CCGCACGGCC AGCTGTACAA CCACGCCGCC
ATCGATTCCG AGTTGGCAGC TGCGCTGGCG CAGGCCGTCC GCGACGTGGA CCCCAAGCTA
GTGCTGGTGG GCCTGGCCAA CAGCGCGCTT GTGGACGAAG GCCGCAAGCT GGGGCTGGTC
ACGGCCGAAG AGTTCTTCGC CGACCGCAAC TACACCGACG AGGGCCGCCT GGTCAGCCGC
AACGATCCTG CCGCGCTCAT ACGCGACGAA GAACACGCCA TCGAGCGCGT CAAGAACGCC
ATCCGCGAAG GCGCCGTGCT GTCCGTCACG GGCAAGCTGG TGGACCTCCA CCCCGACACG
CTGTGCGTGC ACGGAGATTC CCCCAGCGCG CTGGCCTTCG TCAGCCGCAT CCGCCAGGAG
CTGGAACAAG ACGACATCGC CATCAAAGCA GTGGGAGCTG AATAA
 
Protein sequence
MYRIDLNSDL GESFGRYTLG LDDQIIPLVS SANIACGQHA GDPVVMRKTV GMAKDAGIAI 
GAHPGYPDLQ GFGRRDMHLS PDEAYSYMLY QIGALQAFCS AQGVQLAHVK PHGQLYNHAA
IDSELAAALA QAVRDVDPKL VLVGLANSAL VDEGRKLGLV TAEEFFADRN YTDEGRLVSR
NDPAALIRDE EHAIERVKNA IREGAVLSVT GKLVDLHPDT LCVHGDSPSA LAFVSRIRQE
LEQDDIAIKA VGAE