Gene Elen_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0162 
Symbol 
ID8414446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp225817 
End bp226974 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content70% 
IMG OID645023142 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003180545 
Protein GI257789939 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCG ACGAGGAACG GAGCGGCCCG AGCCGCACGC AGGCAACAGG ATCATCGAGT 
GCCGTCACGG CGCTCGTCGC CATTGCGGCC TTCCTCCTGT TCGGGCTCAA CAACACCGAG
ACGACCGCGC TTCCCACCTA CGTCATGTCG CTTGGCGCCG GACCGTTCGT CGCCAGCTTG
CAGAACAGCC TGTTCGTGCT GCTCGCCGTC CTCCTGCGCA TCCCGCTCGA GCGCGTGGTG
GAGCAGCGAG GAAGCCGCTT CGCCATGATC GCGGGAGCGT TGGGGTACAC CGTGCCGTGC
CTGGCCCTCG TCGGTTGCTC CGAGCTGTGG CAGGTCGTGG TCCTGCGCCT GGCGCAGGCG
TTCGGGCTGG CGCTGTTCCA ACCGAGCGTG GCGCAGTACC TCGCAGCCAC CTCCCCCGCC
TCCAAGCTGG GGAGGCGGTT GGGAATCGTG CGGTTCGCAA CCACCGCCTC GCTGATGGCG
GGGCCGGTGA CCATCTTCCC GCTCATCGAC GCGCACGGGT ACGGGGCGTT CTTCGTCGCG
CTCGCGCTTG TGGGAACGTG CGGCACGGCC GTCGCCCTCG CGCTCCCCGC GTCCTCTCCC
CTGGGCCAGC GGGTGCTCCT CCTCGCCAGC CCGCTCCTGC TCGCGTCGGG CTACAGCGTG
GTCATGAACT TCGGCCAGAC CCTCGCCGAA GAAGCGCTCG CATCCTGCAA CGACGGCATG
CTGTTCGCGT TCCTCAGCAC CGGAGGCCTC GTCGGCAGCC TCGTCGCCGG ATGGGCGACC
GATCGGTTCG GCGCGAAGCG CTCGGTGGGC TGCACCATCG CCGCCAACGG CCTGGGGCTG
CTGCTCATGG CGCTGGGCCG CAGCCCCGAA GCGGTCCTCG CGGGGGCGTT CCTGTGCGGA
GCGGGATACT TCGGCGCCAC GGCCACGCTC GTCGCCGCCG CGGGCGCATC GTCGGGCGGC
GGCGCCGGCA CGTTCCTGGC GCGGCAGCAA AGCGCGCTCG ACCTGGGAAT GATCGCGGGA
GGGCTGCTGG CCGGAGCCAT GATGCAGGGC GGCTTGCCGG TTTCCGCGAC CTATCTGGCA
ACCTCGGCGG TCGCCGGGGC GGGTCTGGTC GCGTGGGGTA TGATGTATCC GAACACGAAG
GGGAAGCCGA AGCGCTAG
 
Protein sequence
MGADEERSGP SRTQATGSSS AVTALVAIAA FLLFGLNNTE TTALPTYVMS LGAGPFVASL 
QNSLFVLLAV LLRIPLERVV EQRGSRFAMI AGALGYTVPC LALVGCSELW QVVVLRLAQA
FGLALFQPSV AQYLAATSPA SKLGRRLGIV RFATTASLMA GPVTIFPLID AHGYGAFFVA
LALVGTCGTA VALALPASSP LGQRVLLLAS PLLLASGYSV VMNFGQTLAE EALASCNDGM
LFAFLSTGGL VGSLVAGWAT DRFGAKRSVG CTIAANGLGL LLMALGRSPE AVLAGAFLCG
AGYFGATATL VAAAGASSGG GAGTFLARQQ SALDLGMIAG GLLAGAMMQG GLPVSATYLA
TSAVAGAGLV AWGMMYPNTK GKPKR