Gene Elen_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0158 
Symbol 
ID8414442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp220149 
End bp220835 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID645023138 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003180541 
Protein GI257789935 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGAAG AAATCTTGAC ACCCGGATGG CGTCGCGACA TCAAAATGGA TCGCCGTTCT 
CGGCGCACGC GCAACGCGCT GACGACGGCG CTCATGGCGC TTTTGAAGGA GCGCCCGCTC
AAAAGCATCA CCGTCACTGA GCTGGCCGAG CTGGCCGACG TGAACCGCGC CACGTTCTAC
GTGCACTTCC AGGACGTGTA CGACATGTTC GACCAGGTGA AAGAGGAGTT CTGCAACATC
TGCCGCGAGC TGGTGGACGC GCATGGCGAA GAGCTGGCGC GCAACGAGAA CCGTCCGTTC
CTCGAGGACA TTTTCAGCTA CTTCGAAACG AACGAAGACG CGTTCGCCAT CGTGTTCGGC
GACAACGCCG ACGGGGCCTT CCTGGGAGAC GTCATCGACG TAGTGCGCGA CAGCTGCCTC
ACGGCCGTCG CGCCCCTCGA GGCCGTGGAG CGCCGGGAGC GCGACCAGGG CCTGACGCCG
AACCGCGACC GCGCCCTCGG CATGGCGCTG TGCAACTACC AGTTCGACTT CATCGCCGGC
GGCATCGTCA GCATGCTGAA AAGCTGGCTG GCCAGCGACC GCCGCGAGTC CATCGACACC
ATGGTCGCCC TCGCCGACAG CTACCTCAAC GTGCTGGGCG AAGGCGTCCT CCAGCGCAAC
CTCGCGCTGG CCGAGCGCCC GTCGTAG
 
Protein sequence
MSEEILTPGW RRDIKMDRRS RRTRNALTTA LMALLKERPL KSITVTELAE LADVNRATFY 
VHFQDVYDMF DQVKEEFCNI CRELVDAHGE ELARNENRPF LEDIFSYFET NEDAFAIVFG
DNADGAFLGD VIDVVRDSCL TAVAPLEAVE RRERDQGLTP NRDRALGMAL CNYQFDFIAG
GIVSMLKSWL ASDRRESIDT MVALADSYLN VLGEGVLQRN LALAERPS