Gene Elen_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0135 
Symbol 
ID8414419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp187217 
End bp188638 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content64% 
IMG OID645023115 
Productdipeptidase 
Protein accessionYP_003180518 
Protein GI257789912 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01887] dipeptidase, putative 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.502281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATG CTGAACTGAC CAGGAAGATC GACGCGTATC TCGAGGAAAA TTGGGAGACG 
ATGGTCGAAG ACATCGAGAC GCTCGTCCGC ATCCCCAGCT TCGAGGAATC GGACAAGGCG
ACCGAAGGCG CTCCGTTCGG CCCCGGCCCG AAGGAGGCGC TGGAAGCCGC GCTTGAAATG
GCCTCCGACA TGGGATTCAA GACGCACGAT GCCGAGGGCT ACATCGGGTT CGCCGACTTC
CCCGGCAAGA GCGACACGCA GCTGGGCATC ATCGGCCACA TGGACGTGGT TCCCGCCGGT
CCCGGCTGGA ACTTCGAGCC GTACGCGGTC ACGCGCAAGG AAGGCTACCT CGTCGGTCGC
GGCACGCTCG ACGACAAGGG CCCCAGCGTG GTGGCGCTGC ACGCCATGAA GTTCTGGAAG
GACTTGCAGG ACGCCGGCGA GGCTCCTCAG TTCCCCTACA CCGTCCGCTT CCTGTTCGGC
GCGAACGAAG AATCCGGCAT GGCCGACGTG GCCTACTACC ACAAGCATTA CGACGATCCG
GCGTTCCTGT TCACGCCCGA TGCCGAGTTC CCCGTGTGCT ACGGCGAGAA GGGTGGCTAC
GACGGCGAGC TGATCAGCAA GCCCATCGCC GACCGCATCG TGCTGGAGTT CACGGGCGGC
GCGGCCACGA ACGCGGTGCC CGGCATCGCC GAGGCCGTGG TGAAGGCCGA CGCTGCCGAC
CTGCCGAATA CTGATCGCAT TACCGTTGCG GCCGACGGCG AAGGCCGCGC GAAGATCACT
GCGGCCGGCA AAGGAGCGCA CGCCTCCATG CCCGAAGGAG GCGTGAACGC CATCGGCCTC
ATCGTGGACT ACCTGCTGGA GCACGACCTG TGCACCGCCG ACGAGCGCGC GTTCTTCGAG
CTCGACCAGA AGCTGCTCAA TCATACCGAC GGCAGCGGCA TCGGCATCAA GAGCTCCGAC
GAGTACTTCG GCCCGCTCAC CGTCATCGGC GGCACCATCA AAATCGAGGA CGACCGCTTT
GTGCAGACGC TCGACAGTCG GTTCCCCACG TCCATCACGG CCGACGAGAT CACCGAGCGC
CTGCGCCAGC TGGCGAGCGA GATCGGCGGC TCGTTTGAGA ACACGCTGCT TATGGAGCCG
TTCCTCGTAA AGCCCGACAG CCCTGTGATC CAGGCGCTGC TGAACGCGTA CAACGAGGCC
ACCGGCGAGG ACGCGAAGCC GTTCACCATG GGCGGCGGCA CGTACGCGCG CGAGTTCAAG
AGCGGTGCCA GCTTCGGTCC CGAAAAGCCG TGGGTTGAGG ATCCCGAATG GGTTGGCATG
ATGCACGGTC CGGACGAGGG CGTCAGCGAG GACCTGCTGA AGCAGTCCTT CAAGATCTAC
GCGCTCACGC TGGACAAGCT CATGCAGCTC GACCTGCAAT AG
 
Protein sequence
MEHAELTRKI DAYLEENWET MVEDIETLVR IPSFEESDKA TEGAPFGPGP KEALEAALEM 
ASDMGFKTHD AEGYIGFADF PGKSDTQLGI IGHMDVVPAG PGWNFEPYAV TRKEGYLVGR
GTLDDKGPSV VALHAMKFWK DLQDAGEAPQ FPYTVRFLFG ANEESGMADV AYYHKHYDDP
AFLFTPDAEF PVCYGEKGGY DGELISKPIA DRIVLEFTGG AATNAVPGIA EAVVKADAAD
LPNTDRITVA ADGEGRAKIT AAGKGAHASM PEGGVNAIGL IVDYLLEHDL CTADERAFFE
LDQKLLNHTD GSGIGIKSSD EYFGPLTVIG GTIKIEDDRF VQTLDSRFPT SITADEITER
LRQLASEIGG SFENTLLMEP FLVKPDSPVI QALLNAYNEA TGEDAKPFTM GGGTYAREFK
SGASFGPEKP WVEDPEWVGM MHGPDEGVSE DLLKQSFKIY ALTLDKLMQL DLQ