Gene Elen_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0118 
Symbol 
ID8414401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp158251 
End bp158748 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID645023097 
Productprotein of unknown function DUF163 
Protein accessionYP_003180501 
Protein GI257789895 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.825891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCGG TGTCGAAGGG ACGGCGTATG AAGTTCACCA TAGTGGCGGT GGGAAAGCTG 
AAGGAAAAGT TCTGGACGGC TGCGTGCGCC GAGTACCTGA AGCGCATGCA GCCGTACGGT
AAGACCGAGG TGCGCGAGAT CGCCGACGTC GATCCTGCGC GCGCGGGCGG CGTGGATGCA
GCGCGCGACC GCGAGGGCGC CGCCATCTTG GCCGCGCTCG GGCCCTCGGC GCATGTGGTG
CTGCTGGCCA TCGACGGCAA GCAGCGTTCG AGCGAGAGCT TCTCGCAGCG CATCGACGCG
CTCAAGCTGA ACGGCGCGAG CGATATCGCG TTCGTCATCG GCGGCTCCGA CGGCGTGAGC
GCCGCGGTGC GTCAGCGTGC CGACGAGACG CTGTCGTTCG GCCCTATCAC GCTGCCGCAC
AACCTGGCTC GTGTGGTGCT GCTGGAACAG CTCTACCGCG CCCAGAAAAT TTCACGCGGC
GAGCCATACC ATAAATGA
 
Protein sequence
MIAVSKGRRM KFTIVAVGKL KEKFWTAACA EYLKRMQPYG KTEVREIADV DPARAGGVDA 
ARDREGAAIL AALGPSAHVV LLAIDGKQRS SESFSQRIDA LKLNGASDIA FVIGGSDGVS
AAVRQRADET LSFGPITLPH NLARVVLLEQ LYRAQKISRG EPYHK