Gene Elen_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0102 
Symbol 
ID8414385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp130665 
End bp131717 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content62% 
IMG OID645023081 
Producttype II secretion system protein 
Protein accessionYP_003180485 
Protein GI257789879 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGA AGATGCTTGA GAGCAGCGCT GTTTCCGCCT TCTGCGAAAG CGTCGCCGTC 
ATGCACTCCG CCGGCATCCA GATGGACGAA GCCGTCTTTC TGCTGGGCGA GAACATGGAA
GACGCCGCGT TCAAACGCGC GTGCGACGAC GTATACAAAG AACTCATCGT CGGCAAGCCC
CTGGCGCTCG CAATGGACGA TTCAGGATGT TTCCCCTCCC ACGTCGTCGA CATGGTGGGC
GCAGGCGAGC ACGCGGGCCG CTTAGAGAAC GTGCTGTGGA GCTTGGCGAG ATACTACGAC
GAGGAAGATC GCCTGTACGC CAAGATAAAG AACGCGATCG CCTACCCGGC TGCGCTGCTG
TGCGTCATGT CGGCAATCCT GCTGTTCACC GTCATCGTGA TTCTACCCGT GTTCGTGGAT
GTGTACCATG GCCTCACCGG CAACTTGACG GCCGGCTCCT TCGGATACGT GAACGCTTCC
ATCATCATAG GCTGGATCGC TCTGGGCGTT ACGCTGCTGT GCACCGTGCT CGTAGTGCTG
GGCGTGCTGG CCGGCCGCTC GGCGGCAGGG CGCCAGCGCT TGCTGCGCCT GTTCGAAAAG
GCGCCCCTCA CGCGCGGACC TATGCGCCAG ATGGCCGTTA GTCGGTTCAC CGCGGCGCTC
GCCACGTTCG TAGCTGCCGG CGTGGACACC GATACCGCTA TGGAGAAGGC CGTGGCCATG
GTGGACCATG GGAACTTGAA ATCCCAGCTG GAAGCGGTGC GGATGCAGAT GACGGATCCC
GCCCAGGCCA AGAGCCTCGC GCAAGCCATC TTCGACAACA ACGTCTTCGA GCCCATCTAC
GCCCGCATGC TGGTCGTGGG CACGCGCTCT GGCAGCTTGG AAACCGTGCT GGCAAGCCTG
TCTGACACGT TCTTCGACGA CTCTATCGTG CGCCTCGACG GTCTTATCGA CAGCGTCGAG
CCCACGCTGG CCGCGTTCCT CACCGTGGGC GTGGGGGCTA CGCTCATCGC GGTCATGCTC
CCGCTCATCG GCATCATGGG ATCGATCGGC TAG
 
Protein sequence
MATKMLESSA VSAFCESVAV MHSAGIQMDE AVFLLGENME DAAFKRACDD VYKELIVGKP 
LALAMDDSGC FPSHVVDMVG AGEHAGRLEN VLWSLARYYD EEDRLYAKIK NAIAYPAALL
CVMSAILLFT VIVILPVFVD VYHGLTGNLT AGSFGYVNAS IIIGWIALGV TLLCTVLVVL
GVLAGRSAAG RQRLLRLFEK APLTRGPMRQ MAVSRFTAAL ATFVAAGVDT DTAMEKAVAM
VDHGNLKSQL EAVRMQMTDP AQAKSLAQAI FDNNVFEPIY ARMLVVGTRS GSLETVLASL
SDTFFDDSIV RLDGLIDSVE PTLAAFLTVG VGATLIAVML PLIGIMGSIG