Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0096 |
Symbol | |
ID | 8414379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 127107 |
End bp | 127622 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645023075 |
Product | Shikimate kinase |
Protein accession | YP_003180479 |
Protein GI | 257789873 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.650156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA AAGACAACAT CGTGCTCATC GGCATGCCCG GCGCCGGCAA ATCTACCCTC GGCATCGTGC TGGCGAAGAT CTTGAACTAC GACTTCATCG ACGCCGACCT CGTCATCCAG AACAGCTGCG ACAAGACGCT GCAGAAGCTC ATCGACGCGT GCGGTCCCGA GGGCTTCATC CAGGTGGAGA ACGAGATTCT GCGCGAGCTG AACGCGTCGA AGTCCATCAT CGCCACGGGC GGCTCGGCCG TGTACTCCGA CGAGGCCATG AAGCATCTCG CCGAGATCGG GACCATCGTG TATCTGAAGA TCACGTACGA CCAGCTGGTC AGCCGTCTGA GCGACCTGCA GGAGCGCGGC GTGGTGCTGA AGGGAGGCAT CGGCATGAGC CTGCGCGAGC TGTACGACGA GCGTCTGCCG CTGTACGAGC AGTACGCCGA AGTCACCGTC GACGTGAACG ACCTGTCCAT CACCGCCGCC GCCCGCAAAG TGGCCGACGC CCTGAAGCAA GCGTAA
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Protein sequence | MAEKDNIVLI GMPGAGKSTL GIVLAKILNY DFIDADLVIQ NSCDKTLQKL IDACGPEGFI QVENEILREL NASKSIIATG GSAVYSDEAM KHLAEIGTIV YLKITYDQLV SRLSDLQERG VVLKGGIGMS LRELYDERLP LYEQYAEVTV DVNDLSITAA ARKVADALKQ A
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