Gene Elen_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0088 
Symbol 
ID8414370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp117523 
End bp118026 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID645023066 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003180471 
Protein GI257789865 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG AAGACTACAT GCGCATGGCA ATCGAGGAAG CGCGCCGCGC CGAAGAACTG 
GACGAAGTCC CCATCGGGGC CGTTGTCGTA TACGAGCCCA TCGATCCTGG AACGCGCCGC
CCCTTGGCCG AGCCGCAGGT GATCGCGCGC GCGTGCAACC TGCGCGAGAC TACGCAGGAT
CCGGCGGGGC ATGCCGAGTT CATCGCGCTC AAGCAGGCGG CCGAGCGTTT GGGCGTGTGG
CGGTTAACCG GCTGCACGGT GTACGTGACG CTGGAGCCGT GTGTGATGTG CGCGGGCCTT
ATGCATCAAG CGCGCGTCGA CCGCTGCGTG TACGGCGCGG CCGACCCGAA GGCGGGCGCT
CTCGGCACGC TGTACGCGGT CAACGCAGAC GAGCGCCTCA ACCACACCTT CGAAGCTGTC
TCTGGCGTTC TGGGCGATGA ATGCGCCGAG CTGCTGCGCA GCTTCTTCGC GCGCAAGCGC
AAGAAACGAA TGGAATCGAA ATGA
 
Protein sequence
MTDEDYMRMA IEEARRAEEL DEVPIGAVVV YEPIDPGTRR PLAEPQVIAR ACNLRETTQD 
PAGHAEFIAL KQAAERLGVW RLTGCTVYVT LEPCVMCAGL MHQARVDRCV YGAADPKAGA
LGTLYAVNAD ERLNHTFEAV SGVLGDECAE LLRSFFARKR KKRMESK