Gene Elen_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0057 
Symbol 
ID8414337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp71857 
End bp74064 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content69% 
IMG OID645023033 
Productthiamine pyrophosphate protein domain protein TPP-binding 
Protein accessionYP_003180440 
Protein GI257789834 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID[TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA AACTGCTGAT GGGGAACGAG GCGTTCGCGC ATGCGGCGTT GGAGGCCGGG 
GTGCGCGTGG TGGCGGGCTA CCCGGGCACG CCGTCGTCCG AGCTGATCGA GACGGTGGCG
AAGCTGCATG CCGACGGCGC CGCGCGCGGC ATCCACGTGG AGTGGTCGAC GAACGAGAAG
TCGGCCTTGG AGCTGCTGGC GGGCGCGTCG TACACGGGCG CGCGCTGCCT GTTCACCTGC
AAGCAGGTGG GGCTCAACGT TGCCAGCGAC GCGCTGATGA GCTTGAACTA CGTGGGCGTG
AAGGGCGGCA TGGTGCTGTT CGTGGCCGAC GATCCCGGTC CCATCTCGTC GCAGACCGAG
CAGGACACGC GCCGCTTCGC CAGCTTCGCG AAGCTGCCGG TGCTCGATCC CGCCACGCCC
GACCAGGGCT TCGACATGAT GCAGGCCGCA TTCGACCTGT CCGAGCGCTA CCATACGCCC
GTCATCGTGC GTCCCACCAC GCGCATCAAC CACGCCTCGA CGTTCTTCGA CGTCGCGGAC
GCCACCGACG CGCGCCCGGT GCCCGACGAG GGCTTCGAGC GCAACCCGAA GTGGGTCATC
TTCCCGCGCC GCGCCTACCA GGCGCACGGC GAGATCAACG AGCGTTTGGC GGCCATCGCG
CACGATTTCG CCGTCGATCC CGCGCTGGCC GCGTTCAACC CGATGGTCGA GGGCGGCGCG
CAGTCGACCG AGGATGTACG AACGAATGTT TCACGTGAAA CATTCGACGA CGGGAGCATG
CCGAAGACGG CGACGAGTGC GGGCGCCAAG GCGGTGGGGA TCGGCGCGGG CGTGTTGGAG
TCCGCATCTG CCGCAGTCGC GCCGCGCCTC GGCATCGTAG CGGGTGGCGT GTCGGCCGCC
TATGCGCGCG AGGCGCTGCG CATGGTGGAA GCGCGCGCGG CGGCAGCGGG CGTGGAAATG
CCCGCATACC GGTTCTGGCA GGTGGGAACG CCCTACCCGT TCCCGGAGGA GCTGGCCGCG
ACGTTCGCGG AAGGCCTCGA CGAAGTGCTC GTTCTGGAAG AGCTCGACCA TGTGCTGGAG
GATGCGCTGC TCGTGCACGC GGGTCGCACG CATGCGTCCT ACGAAGTGCG CGGCCGCCTG
ACCGGCGACA CGCGCGATCG TGGCGAGAAC GACGTGGACG ATTGCGCCGC CCGCATCGCG
CTCTTCCTCG GTATCCCGCA GGTGCTCGCC CCCGCAGCGG GCGCCCCTGC GTCGCCGACC
GCCGCATCGG CCGCTTCCGC GTCCGCGACG TCCTCTATTC CGGTTGCCGA AACTGGAACG
AATGTTTCAC GTGAAACATT CGCCTACGAT GCGCCTGCCG ACGCGCCGCT GCCCGTGCGC
CCGCCCGTGC TTTGCGCGGG CTGCCCCCAT CGCGGCAGCT TCTACGCGGT GAAGCGCGCG
CTGGGGAAGA CGCCCGCCGT GCTGTGCGGC GACATCGGCT GCTACACGCT GGGCAACGCG
ATGCCGCTGG ACGCCGTGGA CACCTGCCTG TGCATGGGCG CGGGCATCAC GATGGCGCAG
GGCTTCGCCG TGGCCGAGCC GCACAAGAAG ACGCTGGCGT TCGTGGGCGA CTCCACGTTC
TTCGCCAGCG GGCTGCCTGG CCTGGTGAAC GCTGTGTACA ACGGCCACGA CATCACCGTG
TGCGTGCTGG ACAACGCCAC CACGGCCATG ACCGGCTCGC AGCCGCATCC CGGCACCGGC
GTCACGCTCA TGGGGCCGAA GCGCCAACCC ATCTCCATCC CGCGCGTGTT GGAGGCCGTC
GGCTTCGACT GCATCGTGCA TGCGAATCCG CTCGACCTCG ATGCTTCGGT GGCGGCCGTG
CGCGAGGCGC TCGACCATGA AGGCCCCAGC GCCGTCCTGT TCGAGTCGCC GTGCATCCAG
CTGGTGAAGC CGGACGCGCC CGCCGTCGTG GATGCCGAAA CGTGCACGGG CTGCAAGAAG
TGCATCACCG AGATCGGCTG TCCCGGCATC GGCTTCGACG CCGACGCGCG CGGCCCGCGC
AGCAAGCAGC GTGGCCAGGC GTTCGTCGAC CCCAGCCTCT GCAACGGTTG CGGCCTATGC
GTCCAAGTGT GCCCCTTCGA TGCGCTGTCG ATGACGGAAC CCCAAACAGA TGTTTCACGT
GAAACATCTT CGGACGCTTC TGGGTCGGAA GGAGGCTGCC ATGCGTAA
 
Protein sequence
MTKKLLMGNE AFAHAALEAG VRVVAGYPGT PSSELIETVA KLHADGAARG IHVEWSTNEK 
SALELLAGAS YTGARCLFTC KQVGLNVASD ALMSLNYVGV KGGMVLFVAD DPGPISSQTE
QDTRRFASFA KLPVLDPATP DQGFDMMQAA FDLSERYHTP VIVRPTTRIN HASTFFDVAD
ATDARPVPDE GFERNPKWVI FPRRAYQAHG EINERLAAIA HDFAVDPALA AFNPMVEGGA
QSTEDVRTNV SRETFDDGSM PKTATSAGAK AVGIGAGVLE SASAAVAPRL GIVAGGVSAA
YAREALRMVE ARAAAAGVEM PAYRFWQVGT PYPFPEELAA TFAEGLDEVL VLEELDHVLE
DALLVHAGRT HASYEVRGRL TGDTRDRGEN DVDDCAARIA LFLGIPQVLA PAAGAPASPT
AASAASASAT SSIPVAETGT NVSRETFAYD APADAPLPVR PPVLCAGCPH RGSFYAVKRA
LGKTPAVLCG DIGCYTLGNA MPLDAVDTCL CMGAGITMAQ GFAVAEPHKK TLAFVGDSTF
FASGLPGLVN AVYNGHDITV CVLDNATTAM TGSQPHPGTG VTLMGPKRQP ISIPRVLEAV
GFDCIVHANP LDLDASVAAV REALDHEGPS AVLFESPCIQ LVKPDAPAVV DAETCTGCKK
CITEIGCPGI GFDADARGPR SKQRGQAFVD PSLCNGCGLC VQVCPFDALS MTEPQTDVSR
ETSSDASGSE GGCHA