| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0047 |
|---|
| Symbol | |
|---|
| ID | 8414326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 61060 |
|---|
| End bp | 62055 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645023022 |
|---|
| Product | Tfp pilus assembly protein ATPase PilM-like protein |
|---|
| Protein accession | YP_003180430 |
|---|
| Protein GI | 257789824 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
|---|
| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAA CGTACACGGG TGTCGATATC GGGGACAGCA GCATCAAGCT GGCGGTTTCC
GACGGCCAGT CGGTGAGCAA GGTTGCCATC GAGATGCTGC CCGAGGGCCT GGTGGCCGAC
GGGCGCATCG TCAGCCACGA CGCGATGGCC GACTTCATCA AAAGCGTGGT AAGAAGCATC
GGCGGCGTTT CGAAGGACGT AGCGTTCGTG GTTCCGAGCT CCGACAGCCT GTTCCGTCGT
CTGTCGCTTC CCGCCATGAC CGAGAAAGAG CTGCGGCTGA ACCTGCCGTA CGAGTTCCGC
GATTACATAT CGCAAGGCAA AGACCGCTAC GTGTACGATT ATGCGATGTT GGGCATGCGC
AACGACGCCG ACGGCCAGCC CGAAGGCATG GATCTGCTGG CGGTTGCGGC GCCTAAGCAG
GCCATCGCCG ACTATACCGA GATGTTCCGT CGCGCAGGCT TGAAGCTGAA GGTGGCGCTG
CCCGAACAGG CGGCGTACCA GAACCTCGTG GGAGGCAATC CTCGCGCGCT GGCTAACTGC
TGCGTGATAG ACTTCTCCCA TCATATGACC AAGCTGCATT TCTTCCTCGA CGGCGCCTAC
GACGTGGCCC GCGTCATAGA GATCGGCGGC ATCGACATCG ATCGCGCCAT CGCGAACGAA
TACGGCGTCG ACGAGCACGT TGCCGACCAG TACAAGCGCA CCGACTACCA GGGCGCGCAG
TGCTCCGAGG CCGCCCGCGC GGTGTACCAG TCCATCGCGA TTGAAATCGG GCGCGCGCTG
AACTTCTACG GCTTCAACAA CCCCGACGCT GTCATCGAGG TGGCGTACTG CTGCGGTGGC
GGGCTGCTTC TGGATCCGCT GGTAGAGGCG GTGGCTGCCC ATGTCGACTT GCGCGTGTCG
TCCATCGTCG ACGTGCTGCC GCCGATGAGC GCGCCTTTGG GCGAGGCTCT TCGCTGTCCG
GTTGCCATCG GCGCCACCAT GAAGGCGGGG CGGTAG
|
|---|
| Protein sequence | MGKTYTGVDI GDSSIKLAVS DGQSVSKVAI EMLPEGLVAD GRIVSHDAMA DFIKSVVRSI
GGVSKDVAFV VPSSDSLFRR LSLPAMTEKE LRLNLPYEFR DYISQGKDRY VYDYAMLGMR
NDADGQPEGM DLLAVAAPKQ AIADYTEMFR RAGLKLKVAL PEQAAYQNLV GGNPRALANC
CVIDFSHHMT KLHFFLDGAY DVARVIEIGG IDIDRAIANE YGVDEHVADQ YKRTDYQGAQ
CSEAARAVYQ SIAIEIGRAL NFYGFNNPDA VIEVAYCCGG GLLLDPLVEA VAAHVDLRVS
SIVDVLPPMS APLGEALRCP VAIGATMKAG R
|
|---|
| |