| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_R0045 |
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| Symbol | |
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| ID | 8414174 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1453848 |
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| End bp | 1456782 |
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| Gene Length | 2935 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 645022886 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.303465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGAAGATGGT AAGGGCAAAC GGTGGATGCC TTGGCACAAG AAGCCGATGA AGGACGTGAT
AAGCTGCGAT AAGCCACGGT AAGGAGCACA TATCCTGTGA CCCGTGGATT TCCGAATGGG
TAAACCCACC AAGAGTCATT TCTTGGTACT TCCTGCTGAA TATATAGGCA GGATAGAGGT
AACCGGGGGA ACTGAAACAT CTAAGTACCC CGAGGAAGAG AAATCAAACG AGATTCCCCT
AGTAGTGGCG AGCGAACGGG GATATAGGAC AAACCGTCAG TTGCGCAAGC GCTGACGGGG
TTGTAGGACC ATTCATTGTG GAGTTACAAA ACTTCGTGGA AGCAGAACAG TTTGGAAAAA
TTGGCGAGAC AGGGTAAAAG CCCCGTACGC GAATCTGCGT AGACTCCCGA GTGGCACCTG
AGTACTGCCG GACACGTGAA ACCCGGTGGG AACCTGGGGG GTCCACCCTC CAATCCTAAA
TACTCTCTTG TGACCGATAG TGAACCAGTA CCGTGAGGGA AAGGTGAAAA GCACCCCTAG
CGGGGAGTGA AATAGTACCT GAAACCGTTT GCCTACAAGC AGTCGGAGCA GATTTTTGTC
TGTGACGGCG TGCCTTTTGT AGAATGAGCC AGCGAGTTAC GGCATGTGGC AAGGTTAAGC
TAAAAAGCGA GCCGCAGCGA AAGCGAGTCT GAATAGGGCG AGTGAGTCGC ATGTCGTAGA
CGCGAAGCCA GGTGAGCTAT CCATGAGCAG GCTGAAGCGG GGGTAAGACC CCGTGGAGGG
CCGAACCCAC TTAGGTTGAA AACTGAGGGG ATGACTTGTG GATAGGAGTG AAAGGCCTAT
CAAACCTGGA GATATCTCGT TCTCTCCGAA ATAGCTTTAG GGCTAGCCTC GGATGTTTAC
CAATGGGGGT AGAGCACTGA ATAGTTGCGG GGGCTTCACC GCCTACCAAG ATTAATCAAA
CTCCGAATAC CATTGGTCTA GAATCCGGGA GTCAGAATAT GTGGGCTAAG CTGTGTATTC
GAAAGGGAAA CAGCCCAGAC CGCCCGCTAA GGTCCCAAAA TCAATGCTAA GTGGCAAAGG
ATGTGCGTTT GCTCAGACAA CCAGGATGTT GGCTTAGAAG CAGCCATTCA TTTAAAGAGT
GCGTAATAGC TCACTGGTCG AGTGGACATG CGCCGACAAT ATACGGGGCT AAGCATTGTA
CCGAAGCGGC GGATCAGTAC TTTGTACTGG TGGTAGGAGA GCTTTCTGTA CGGGTTGAAG
CAGTTGGATA ACCAACTGTG GACTGTCCAG AAGTGAGAAT GCTGGCATGA GTAACGAGAG
ACATGTAAAA AACATGTCCG CCGTAAACCC AAGGTTTCCT GGGCAAGGCT AATCCTCCCA
GGGTTAGGCG GGAGCTAAGG CAAGGCCGGA AGGCGTAGTC GATGCACAAC AGGTAGAAAT
TCCTGTCCCT CCAAAAGAGC GTTATCACCA ATGGGGTGAC GGAGAAGGGT AGCTAGGCGG
GGTTCTGGAC GTCCCCGTGA TGACACGTAG GCTGAGAAGT AGTGAAATGC GCTTCTCATG
TGGCTGAGGT GTTGGACGAA GCAATTGAGT GAAGCTAGTA AGCCCATACT TCCAAGAAAA
ACCTCTAGGG AGCTCTGAGG AGCCCGTACC GCAAACCGAC ACAGGTGGGT GGGTAGAGCA
TACCAAGGCG ATCGGGAGAA CTATGGTTAA GGAACTCGGC AAAATTGCCC CGTAACTTCG
GGAGAAGGGG TGCCGGTTTC GGTGAAGGGA TTTACTCCCC GAGCTAAGAT CGGTCACAGT
AAATAGGTCC AAGCGACTGT TTATCAAAAA CACAGGACTC TGCTGAAGTC GTAAGACGAC
GTATAGGGTC TGACGCCTGC CCGGTGCCGG AAGGTCACGA GGAGTTGTTA GCATTAGCGA
AGCAGCGAAT CTAAGCCCCG GTAAACGGCG GCCGTAACTA TAACGGTCCT AAGGTAGCGA
AATTCCTTGT CGGGTAAGTT CCGACCTGCA CGAAAGGCGT AACGATTTGG ACGCTGTCTC
AACCATAGAC CCGGTGAAAT TGCACTAGTC GTGAAGATGC GACTTACCCG CAGAAGGACG
GAAAGACCCC GTGAACCTTT ACTGCAGCTT GACATTGGCT GCCGGTTCGT CGTGTAGAGG
ATAGGTGGGA GACTTTGAAC CAGGGACGCC AGTCTCTGGG GAGTCACCCT TGGAATACCA
CCCTCGACGT TCTGGCATCC TAACTTGCGA CCGTTATCCG GCGTGAGGAC CGTGTCAGGT
GGGTAGTTTG ACTGGGGCGG TCGCCTCCTA AAATGTAACG GAGGCGCACG TAAGGTCTGC
TCAGAATGGT CGGCAACCAT TCTTTTGAGT GCAAGAGCAT AAGCAGGCTT GACTGCGAGG
CCTACAAGCC GAGCAGATGG GAAACCAGGT TCTAGTGATC CGGCGGCTCA GAGTGGTATG
GCCGTCGCTC AACGGACAAA AGGTACTCCG GGGATAACAG GCTGATCTTC CCCAAGAGTC
CACATCGACG GGAAGGTTTG GCACCTCGAT GTCGGCTCAT CGCATCCTGG GGCTGGAGCA
GGTCCCAAGG GTATGGCTGT TCGCCATTTA AAGCGGTACG CGAGCTGGGT TCAGAACGTC
GTGAGACAGT TCGGTCCCTA TCCTCTGTGG GCGTAGGAAA ATTGAGGGAG GCTGCCCCTA
GTACGAGAGG ACCGGGGTGG ACGGACCTCC GGTGTACGGG TTGTTAACCA ATAGCATTGC
CCGGTAGCTG AGTCCGGTCG GGATAACCGC TGAAAGCATC TAAGCGGGAA GCCCATCCCA
AGATGAGTTT TCCTTTCGGT AAGACCCCTT GTAGACTACG AGGTTGATAG GATGCAGATG
TAAGTGCTGT AAGGCATTCA GTCGAGCATT ACTAATCGGT CGAGCTCTTC TTTTC
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| Protein sequence | |
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