| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1361 |
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| Symbol | |
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| ID | 8414252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1537515 |
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| End bp | 1538633 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022964 |
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| Product | radical SAM enzyme, Cfr family |
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| Protein accession | YP_003180376 |
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| Protein GI | 257785159 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAA ATAATACTCT TGACGGCACA AACACCACGG TTGACGGTGC AGACACTCCT
ACGCCTGATT CTCGACCACA GAAAACAGCC GCTAAATCTG ACCTTAGAAG CCTTTCATCG
GAACAAATTC TTGACTTGGT AACTTCACTT GGTCAGCCAA AATTCCGTGC AAAGCAAATT
GAAGAATGGA TTTGGTCTAA GGGTGCTACT TCTTTTGATC AGATGAGTAA CCTCCCAAAA
ACACTACGAG AAGAGCTGTC TAAGCAGGTA ATTCTTGCTG GAGCTGAGCA GGTTGTTCGT
CAGGTTTCTG AGGACGGAAG CCGTAAATAC CTGCTTCGTT ATCCTGATGG TACCTCTGTT
GAATGTGTCG GTATGCCAAA TGGTAACAAG CTCTCTGTCT GCGCTTCCAC GCAAGCTGGA
TGTGCTATGG GCTGTGCTTT CTGTGCAACA GGTGCTTCTG GCCTCACACG TTCTCTTTCT
GCAAGTGAAA TCTACGAACA AGTTATGCAT GTTCGTGACG ACTTTGACAC ACGTGTTACC
AGCGTTGTTC TTATGGGCCA GGGTGAGCCT TTTATGAACT ATGACGCCAC TCTCACCGCT
ATGAGGCGCC TCAACTCCCC CGATGGAGCC GGTATTGGAG CCCGTCATAT TACAGTTTCT
ACCTGCGGAG TTATCCCGAT GATTAAGCGT TTTGCCTCTG AGCCAGAGCA GTTTACGCTT
GCAGTGTCAC TTCATTCCGC AGTTCAAAAG ACGCGCGATG CTCTCATGCC AGGAGTACGC
AAATACTCAC TTATCCATCT TTACGACATT ATGGGTGAAT ATGTCGATAA AACCGGTCGT
CGTCCAACGT ATGAGTATGC GTTAATTAAG GGTGTAAACG ATTCTGACAA TGAGCTTGGA
GCTCTAAGGG ACTTCTGTCG TGGAACACTT TGCCACGTTA ACATCATTCA GCTTAACGAG
ATTGAAGGTT CAAAATTCCA TCCAACTTCC CCTGCTCGCG CACAGGAGTT TGTTAATAGT
CTTAATTCTG TCGGAGTTGA AGCAACTATT CGTCTTTCCC GCGGATCTGA TATTGACGCA
GCTTGCGGCC AACTTTTCCA GAAAAGAAAC GCACGTTAA
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| Protein sequence | MQSNNTLDGT NTTVDGADTP TPDSRPQKTA AKSDLRSLSS EQILDLVTSL GQPKFRAKQI
EEWIWSKGAT SFDQMSNLPK TLREELSKQV ILAGAEQVVR QVSEDGSRKY LLRYPDGTSV
ECVGMPNGNK LSVCASTQAG CAMGCAFCAT GASGLTRSLS ASEIYEQVMH VRDDFDTRVT
SVVLMGQGEP FMNYDATLTA MRRLNSPDGA GIGARHITVS TCGVIPMIKR FASEPEQFTL
AVSLHSAVQK TRDALMPGVR KYSLIHLYDI MGEYVDKTGR RPTYEYALIK GVNDSDNELG
ALRDFCRGTL CHVNIIQLNE IEGSKFHPTS PARAQEFVNS LNSVGVEATI RLSRGSDIDA
ACGQLFQKRN AR
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