| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1350 |
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| Symbol | |
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| ID | 8414239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1521616 |
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| End bp | 1522827 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022951 |
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| Product | hypothetical protein |
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| Protein accession | YP_003180365 |
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| Protein GI | 257785148 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.692835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.661465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCTTT TTGGGAACAT TTCTCGTCGA AACTTTTTTA AGACGGGAGC AGCTAGTGTG
GTGGTTGCTG GCGCAATTAG TATTGCGGAA GGTTGCTCTC ACCAAGCAGG TTTGGGAGAT
GTAGGAAAAC CTCTGGTACT TGATGAGTCT GCTGGCACTA ATGTGTTGGA CTCCTATAGT
TCAGCAGAAT ATTCTGTCCA GCCAAGCCAG ACATGGACAC TTCCTCTAGG AAGCGTGCTA
CACCCTGCTG ACGGTAATTG GATCCCCGTT ACTACGGCTG GCGCGTCTGC TACGCCAATG
GTGAAGGGTT CTGCTCTTTC GCTGACGTCT GGTCAAGTTG TTGATGTTGT TCCTACAGCT
CAGATGAACA ATACTACTGC GGTCATTTAC GATGTTCGTT GCTCCGATTC CGTTTACGCC
TGGGTTGAGG TGGATACCAC AACCTTTGAT TGGGAGCTTT TTGCTGCTCC ATTTTCTGAT
GGCAAGCTTA CAGGAGACGC AAAGGTACTT TACAAAGCTG ATAAAAACTG GGACCCTGCA
CCGTTTGCCT GTGGAGACGA TAAGGTAGTT TGGATTGTCC AGCCTTCTTC CTCGGGCGAG
AAAACCCGCG AGTCTTCTCA CTGCTACGTG TGGCGTGTGG GTGATTCTGA AGGAACAGAC
GCCGTTGAAT CACCAGGTAG ATTTGCTACT GCACCCTCTA TTTCCAAGGG CGTAGTTACT
CTTACTCCCC GAGTTCGTGC TTCCGAAGGA ACCTATTATG GCGTTACGGC ATATCTGCTG
GGAGATAACC TTAAAACTAA GGTTGACCAG CTAGTTATGC CTCAATCTGT TAAACCATTT
GCAGCAAGCC GTGTAGACGA TAAGTTTATT GTGTCCGTTG AAGCAAGTTA TGACTCAGGT
GGTCTTTTAG GCAAGATGGG AACGTACATC TTACCTGCTT CAGGAGAAAA TCCTTACATT
ATTGAGCGTG AACCTTATGC AATATCTTCA GGTAAAGGTA GCCTTTATAT AATTAAGAGT
CGTGCTTCTT ATGTGCTTGT TGATACGCAA AATCAAACGG CAAATTGGCT CTATTCGATG
GATAGAAGCG TTGATTATGG AGAATTTCCT GCTCGAGAGG GCAACTGCGA TTCTTTTGTA
ACCTTCTCAA CTGTTAAGGA CCCTACTAGC GGATATCCTG CCTCTGTGGC AGTTCGTGTA
TTTTCTTTGT AG
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| Protein sequence | MTLFGNISRR NFFKTGAASV VVAGAISIAE GCSHQAGLGD VGKPLVLDES AGTNVLDSYS
SAEYSVQPSQ TWTLPLGSVL HPADGNWIPV TTAGASATPM VKGSALSLTS GQVVDVVPTA
QMNNTTAVIY DVRCSDSVYA WVEVDTTTFD WELFAAPFSD GKLTGDAKVL YKADKNWDPA
PFACGDDKVV WIVQPSSSGE KTRESSHCYV WRVGDSEGTD AVESPGRFAT APSISKGVVT
LTPRVRASEG TYYGVTAYLL GDNLKTKVDQ LVMPQSVKPF AASRVDDKFI VSVEASYDSG
GLLGKMGTYI LPASGENPYI IEREPYAISS GKGSLYIIKS RASYVLVDTQ NQTANWLYSM
DRSVDYGEFP AREGNCDSFV TFSTVKDPTS GYPASVAVRV FSL
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