Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1345 |
Symbol | |
ID | 8414233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 1515012 |
End bp | 1516937 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645022945 |
Product | serine/threonine protein kinase with PASTA sensor(s) |
Protein accession | YP_003180360 |
Protein GI | 257785143 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.138962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGGTA GAATGCTCGG TGGGCGTTAC CAGGTTCAAG ACAAAATTGG TACCGGTGGA ATGGCAACCG TTTACCGCGG ACAGGACCAA GTTCTTGGTC GTACTGTTGC CATCAAAATG ATGCTGCCAC AGTACGCAAA TGACCCGTCC TTTGCTGCTC GTTTTAAGCA GGAGGCACAG GCAGCGGCGG CGCTCTCAAG TCCATACATT GTCTCGGTCT ATGACTGGGG CAAAGACGGC GAGTCTTACT ACATTGTTAT GGAGTATCTG CGCGGTACAG ACCTTAAGAG CGGCATCCGT AAGCATGGAG CTCTTGATTC CCGTAAGGTC GCTCAGATTG GCTCTCAGAT TGCCCAGGCG CTCTCTGTAG CACACCGTCA CGACATCATT CACCGTGACA TCAAACCACA AAACATCATG GTCCAGCCAG ATGGCAACAT TAAGGTCATG GACTTTGGCA TTGCTCGTGC AAAGAACAGC AGTCTAACCA CCGATAACTC TGTTCTCGGT ACCGCTCACT ATGTTTCTCC AGAGCAAAGT ACCGGCAAAC CTTTGGGACC AACCACCGAT ATCTATTCCC TGGGTATTGT CATGTACGAA GCTGCTACTG GTCGCGTTCC CTTTGTTGGC GACGATGCAA TTAGCGTTGC CATGAAGCAA GTCAATGAGG CTCCTCAGCC ACCATCGCTC ATTAATCCCA ACATTGACCC TGCTCTCGAG GCAATCATCC TTCGCTGCAT GGAGAAAAAT CCAGGGGATC GTTACCAGAG CGCTGACGAG CTTGCTCGCG CTCTTCGCGA TTTCATTGCT GGTCGTGCCA CTATTCCAAG TAACACTACT GTTAGCCCTC GCATTGTGAC GCCGCCTCAG CCAACTTCTA GGCTTGATCG CCGCGGCATC GAAGGCTCCA ACACCTACAT GACTCGAGGT GGCGATACTG GTCGCTTGAA CCGCGTTCAT TCTCGTGAAG AAGCTGATGA GCTGGACAAG CGCGAGAATA ATCGTCACAA GCGCAATATT ATCCTTGGTA TTCTAGCTGC TTTGGTTGTC GTAGCTCTTG CTGGTTTTGC TATTGCACAC ATCCTCGGCA ACACCTCCCA GCAGTACCTG GTTCCGCAGT TTGTTGGACA AACAAAAGAC CAAGCAACTC AGGCGCTAAA TGCATCTGGC AGCCACTTTA AACTAGGAAC TGTCACAGAA AGCTATAGCG ATTCTGCTCC TGAAGGCCAA GTTATCGACC AGACACCAAG CGCTAACAGA CAGGCTCCTG AGGGAACCAC TGTTAACCTT GTTATCTCTA AAGGCGCTAA ACCTGCTGCG GCAGTTAAGG TACCCGATCT CACTAACAAG AGTCCATCAG AGGCCGAATC GGCCCTTGCT GCTGTTGGTC TCAAAGCAAG AAATGGTGAT TCGGTTGAGT CGGACAACGT AGCTGTTGGT TACGTTGCAA CACAGGAGCC AGCTGCAGGT AGCGACGCTA AGGCTGGCGA CACCATCACC TATCATTTGT CTTCTGGTAA GGGTAAGGTA GACGTCCCAG ACGTCACGGA GATGACTTCT GAGCGCGCGT CTGACGTTCT GAAAGACGCT GGATTTAAGG TAGAAACTCA ACAGCAGCCT TCATCAAGCG TTCCTGAAGG CCGTGTTATC TCCCAATCCC CAGCTAACGG CAAGGCAGAT AAAGGTTCTA CTGTAACTAT CGTTGTTTCT ACTGGTGCTC AGAGCGGATC TGTTCCAAAT GTTGTTGGCA AAGACTTTGA GACCGCTCAG ACCACGCTCG AAAACGCTGG CTTCCAGGTC AATACTGTTT GGGTCTATGA CGACAACGTT GCCACCGGTA ATGTTGTTGG CCAGACGCCA TCAAGCGCTG TACCTGGCGC TACTATCACC ATCCGCGTAT CCAGTGGACC GCGACCATCA GTGTAA
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Protein sequence | MPGRMLGGRY QVQDKIGTGG MATVYRGQDQ VLGRTVAIKM MLPQYANDPS FAARFKQEAQ AAAALSSPYI VSVYDWGKDG ESYYIVMEYL RGTDLKSGIR KHGALDSRKV AQIGSQIAQA LSVAHRHDII HRDIKPQNIM VQPDGNIKVM DFGIARAKNS SLTTDNSVLG TAHYVSPEQS TGKPLGPTTD IYSLGIVMYE AATGRVPFVG DDAISVAMKQ VNEAPQPPSL INPNIDPALE AIILRCMEKN PGDRYQSADE LARALRDFIA GRATIPSNTT VSPRIVTPPQ PTSRLDRRGI EGSNTYMTRG GDTGRLNRVH SREEADELDK RENNRHKRNI ILGILAALVV VALAGFAIAH ILGNTSQQYL VPQFVGQTKD QATQALNASG SHFKLGTVTE SYSDSAPEGQ VIDQTPSANR QAPEGTTVNL VISKGAKPAA AVKVPDLTNK SPSEAESALA AVGLKARNGD SVESDNVAVG YVATQEPAAG SDAKAGDTIT YHLSSGKGKV DVPDVTEMTS ERASDVLKDA GFKVETQQQP SSSVPEGRVI SQSPANGKAD KGSTVTIVVS TGAQSGSVPN VVGKDFETAQ TTLENAGFQV NTVWVYDDNV ATGNVVGQTP SSAVPGATIT IRVSSGPRPS V
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