| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1345 |
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| Symbol | |
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| ID | 8414233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1515012 |
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| End bp | 1516937 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022945 |
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| Product | serine/threonine protein kinase with PASTA sensor(s) |
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| Protein accession | YP_003180360 |
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| Protein GI | 257785143 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.138962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGTA GAATGCTCGG TGGGCGTTAC CAGGTTCAAG ACAAAATTGG TACCGGTGGA
ATGGCAACCG TTTACCGCGG ACAGGACCAA GTTCTTGGTC GTACTGTTGC CATCAAAATG
ATGCTGCCAC AGTACGCAAA TGACCCGTCC TTTGCTGCTC GTTTTAAGCA GGAGGCACAG
GCAGCGGCGG CGCTCTCAAG TCCATACATT GTCTCGGTCT ATGACTGGGG CAAAGACGGC
GAGTCTTACT ACATTGTTAT GGAGTATCTG CGCGGTACAG ACCTTAAGAG CGGCATCCGT
AAGCATGGAG CTCTTGATTC CCGTAAGGTC GCTCAGATTG GCTCTCAGAT TGCCCAGGCG
CTCTCTGTAG CACACCGTCA CGACATCATT CACCGTGACA TCAAACCACA AAACATCATG
GTCCAGCCAG ATGGCAACAT TAAGGTCATG GACTTTGGCA TTGCTCGTGC AAAGAACAGC
AGTCTAACCA CCGATAACTC TGTTCTCGGT ACCGCTCACT ATGTTTCTCC AGAGCAAAGT
ACCGGCAAAC CTTTGGGACC AACCACCGAT ATCTATTCCC TGGGTATTGT CATGTACGAA
GCTGCTACTG GTCGCGTTCC CTTTGTTGGC GACGATGCAA TTAGCGTTGC CATGAAGCAA
GTCAATGAGG CTCCTCAGCC ACCATCGCTC ATTAATCCCA ACATTGACCC TGCTCTCGAG
GCAATCATCC TTCGCTGCAT GGAGAAAAAT CCAGGGGATC GTTACCAGAG CGCTGACGAG
CTTGCTCGCG CTCTTCGCGA TTTCATTGCT GGTCGTGCCA CTATTCCAAG TAACACTACT
GTTAGCCCTC GCATTGTGAC GCCGCCTCAG CCAACTTCTA GGCTTGATCG CCGCGGCATC
GAAGGCTCCA ACACCTACAT GACTCGAGGT GGCGATACTG GTCGCTTGAA CCGCGTTCAT
TCTCGTGAAG AAGCTGATGA GCTGGACAAG CGCGAGAATA ATCGTCACAA GCGCAATATT
ATCCTTGGTA TTCTAGCTGC TTTGGTTGTC GTAGCTCTTG CTGGTTTTGC TATTGCACAC
ATCCTCGGCA ACACCTCCCA GCAGTACCTG GTTCCGCAGT TTGTTGGACA AACAAAAGAC
CAAGCAACTC AGGCGCTAAA TGCATCTGGC AGCCACTTTA AACTAGGAAC TGTCACAGAA
AGCTATAGCG ATTCTGCTCC TGAAGGCCAA GTTATCGACC AGACACCAAG CGCTAACAGA
CAGGCTCCTG AGGGAACCAC TGTTAACCTT GTTATCTCTA AAGGCGCTAA ACCTGCTGCG
GCAGTTAAGG TACCCGATCT CACTAACAAG AGTCCATCAG AGGCCGAATC GGCCCTTGCT
GCTGTTGGTC TCAAAGCAAG AAATGGTGAT TCGGTTGAGT CGGACAACGT AGCTGTTGGT
TACGTTGCAA CACAGGAGCC AGCTGCAGGT AGCGACGCTA AGGCTGGCGA CACCATCACC
TATCATTTGT CTTCTGGTAA GGGTAAGGTA GACGTCCCAG ACGTCACGGA GATGACTTCT
GAGCGCGCGT CTGACGTTCT GAAAGACGCT GGATTTAAGG TAGAAACTCA ACAGCAGCCT
TCATCAAGCG TTCCTGAAGG CCGTGTTATC TCCCAATCCC CAGCTAACGG CAAGGCAGAT
AAAGGTTCTA CTGTAACTAT CGTTGTTTCT ACTGGTGCTC AGAGCGGATC TGTTCCAAAT
GTTGTTGGCA AAGACTTTGA GACCGCTCAG ACCACGCTCG AAAACGCTGG CTTCCAGGTC
AATACTGTTT GGGTCTATGA CGACAACGTT GCCACCGGTA ATGTTGTTGG CCAGACGCCA
TCAAGCGCTG TACCTGGCGC TACTATCACC ATCCGCGTAT CCAGTGGACC GCGACCATCA
GTGTAA
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| Protein sequence | MPGRMLGGRY QVQDKIGTGG MATVYRGQDQ VLGRTVAIKM MLPQYANDPS FAARFKQEAQ
AAAALSSPYI VSVYDWGKDG ESYYIVMEYL RGTDLKSGIR KHGALDSRKV AQIGSQIAQA
LSVAHRHDII HRDIKPQNIM VQPDGNIKVM DFGIARAKNS SLTTDNSVLG TAHYVSPEQS
TGKPLGPTTD IYSLGIVMYE AATGRVPFVG DDAISVAMKQ VNEAPQPPSL INPNIDPALE
AIILRCMEKN PGDRYQSADE LARALRDFIA GRATIPSNTT VSPRIVTPPQ PTSRLDRRGI
EGSNTYMTRG GDTGRLNRVH SREEADELDK RENNRHKRNI ILGILAALVV VALAGFAIAH
ILGNTSQQYL VPQFVGQTKD QATQALNASG SHFKLGTVTE SYSDSAPEGQ VIDQTPSANR
QAPEGTTVNL VISKGAKPAA AVKVPDLTNK SPSEAESALA AVGLKARNGD SVESDNVAVG
YVATQEPAAG SDAKAGDTIT YHLSSGKGKV DVPDVTEMTS ERASDVLKDA GFKVETQQQP
SSSVPEGRVI SQSPANGKAD KGSTVTIVVS TGAQSGSVPN VVGKDFETAQ TTLENAGFQV
NTVWVYDDNV ATGNVVGQTP SSAVPGATIT IRVSSGPRPS V
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