| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1332 |
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| Symbol | |
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| ID | 8414217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1498673 |
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| End bp | 1499608 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022929 |
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| Product | Glutamate--tRNA ligase |
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| Protein accession | YP_003180347 |
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| Protein GI | 257785130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000257577 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00027046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACCCTT GCGTTGGAAG GTTTGCGCCC ACTCCTTCCG GAAGAATGCA TCTTGGTAAC
GTTTTCTCAG CGCTTATGGC TTGGGCTAGT ACTCGTTCCC AAAATGGCAA CTTTATTCTT
CGCATCGAAG ACTTAGATAT TCGCGCTCAT AACCCTCAAT ATACCTCCTA TCTTCTTGAT
GACCTGCAGT GGTTGGGGCT AGATTGGGAC AGAGGCCCGT TCTACCAAAG TAAGCGTACA
GAGCTCTACC AAGAGGCTCT TTTAAGATTA AAACAGCAGG GGCTCCTATA TCCTTGCTTT
TGCTCCCGAG CAGACTTACA CGTCGCGCAG GCCCCTCATG CCAGCGACGG TACGTATATC
TATGCAGGAA CTTGCAGCAA TCTAAGCCAG TCTGAGCGTG AAGAACTCTC AAAACATAAA
ATTCCAGCAA CACGTATGCG AGTTTCTAAT AAGAACTACA CATTTGAAGA CAAAGTCTAT
GGTCCAATAT CTCAAAACCT TGCTGAATCA TGTGGAGACT TTATTGTCCA ACGTGCAGAC
GGAATCTTTG CTTATCAGCT TGCTGTGGTA GTGGACGATG CTGATATGGG CATAACTGAA
GTAGTCAGAG GATCGGATCT TCTCTCCTCG ACACCTAGAC AACTTTATTT ACAAGACACA
CTTGGTCTTT CTCATCCCAC ATACGCTCAC CTCCCCTTAC TTGTTGCACC GGATGGTAGA
AGGCTTTCCA AACGTGACCG TGACTTAGAT CTTGGTGCCC TTAGAGCTCA AGGAAAAACA
CCAGAAGAAA TTCTTGGCTT TTTGGCTTAT TGCATAGGTC TTGCGGAAAA GGATGAAACT
CTTTCTGCAG CACAAGTTGT AAATCGCTTT TCCTGGGATG CACTTCACGC TCACCGAAAA
AACGTGGTTG TTGAGCATTT TTCACATGTT TTGTGA
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| Protein sequence | MNPCVGRFAP TPSGRMHLGN VFSALMAWAS TRSQNGNFIL RIEDLDIRAH NPQYTSYLLD
DLQWLGLDWD RGPFYQSKRT ELYQEALLRL KQQGLLYPCF CSRADLHVAQ APHASDGTYI
YAGTCSNLSQ SEREELSKHK IPATRMRVSN KNYTFEDKVY GPISQNLAES CGDFIVQRAD
GIFAYQLAVV VDDADMGITE VVRGSDLLSS TPRQLYLQDT LGLSHPTYAH LPLLVAPDGR
RLSKRDRDLD LGALRAQGKT PEEILGFLAY CIGLAEKDET LSAAQVVNRF SWDALHAHRK
NVVVEHFSHV L
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