| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1327 |
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| Symbol | |
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| ID | 8414212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1490087 |
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| End bp | 1491499 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022924 |
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| Product | Mur ligase middle domain protein |
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| Protein accession | YP_003180342 |
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| Protein GI | 257785125 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000399076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000242236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCACAAA AAAAGAGCAG ATTATTTCCT GTAGCTTTTC TCGCTGCTAA AGCAACACTT
GCAGCACTTA AGTTGACTAA TCACGAAGGT GGAACTCTAC CAGGATTTAT TGCGGAGGCC
ATTGACCCTG CATTTTTAGG GGATATCGCT AAGCCAGAAC AGGTTGTCTT TATCACAGGT
ACTAATGGCA AGACAACCAC TAATAACTTG CTCAACGATC TTCTCGCTGA TAACGGTTAT
CAGACTGTTA CTAATCGCGT TGGCGGTAAT ATTTCTAGTG GTTTTGCAAG CTCATTTGCA
AAGAACGCCA CATGGAAGGG CGCTTCAAAG ACTAAGCTTG CAGTTATGGA GTTTGATGAG
CTCTCTGGAC CTCGCATTTT TCCTTATTTG CAGCCTGATA TTTTGTCCGT TACTAATTTG
TTCCGCGATA CGTTTTCTCG CAGTGCAACG CCAGACTATG TGTTTGACGT TATGGATAAG
GGTATCCCTG CTTCAACTCA TCTGATTTTG AACGCAGATG ACATGATTAG CTGCAGACTT
GCCCCTCAAT GTACTCATCG TACGTATTAC TCAATTGCAA GGTTGGCTGA TGATACTGCG
GATCCTGTAG GCATTGTTTC AGACCTTACC GCATGTCCAA AATGTGGCGG CAAGCTCAAG
TGGGATTACG CTCATCTCAG ACATCTTGGC CACGCAACTT GCGAGGAATG CGGGTATACC
AATCCAACTC CTGATTATGA GGTTATCTCA GTAGAGCCAG AGACTGGCAA GTTTGTGGTC
AAAGAACACT GCCACGAGGG TGCACCAACG TACGAATATA AGCTCAACAG CTACTCTATC
GTTAACCTCT ACAACCTGTT TGTAGCTATT GTTACCGCGC GTGAGATGGG TCTTGCGCCT
GCAACTATCG CCGCGTCTTT GCAGCGCGTT AACATTGCTT CTTCCAGGTA TAACGAGATT
GATTACAACG GTCGTCGCCT TATTAGCATG GCTTCTAAGG GCGAGAATGA CACGGCAACC
TCAGTTACTA TTGATATCCT GCGCAAACAA CCAGGCGATA AGGCAATTAT CATCATGATT
GCTGATGCAT ATATGGCAAA AGCTAAGGAC CAGACAGAGT ACATTGGCTG GTACTACCAG
ACCGACTTTG AGTTCCTGCA AGATCCAAGT GTTAAGCAGG TCATTATTTA CGGTGATACA
TCACTTGATC TGCAGCTCAG ACTCAGACTT GCGGGCGTTG ATCCTGCTAA GACCTTTGTA
GCAAACTCTC CTGAAGAGAC TGCTGACCTG GTTGATCTCA ATGCTTGCCA ACACGTTTTC
TATGCACATG GCCTCTACAA CGGTGGTATT GCTGATATCA GCAGAAACCG TATCATTGAG
CGCTTAAAAC AGATGGAGGC CTCCAATGAG TAA
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| Protein sequence | MAQKKSRLFP VAFLAAKATL AALKLTNHEG GTLPGFIAEA IDPAFLGDIA KPEQVVFITG
TNGKTTTNNL LNDLLADNGY QTVTNRVGGN ISSGFASSFA KNATWKGASK TKLAVMEFDE
LSGPRIFPYL QPDILSVTNL FRDTFSRSAT PDYVFDVMDK GIPASTHLIL NADDMISCRL
APQCTHRTYY SIARLADDTA DPVGIVSDLT ACPKCGGKLK WDYAHLRHLG HATCEECGYT
NPTPDYEVIS VEPETGKFVV KEHCHEGAPT YEYKLNSYSI VNLYNLFVAI VTAREMGLAP
ATIAASLQRV NIASSRYNEI DYNGRRLISM ASKGENDTAT SVTIDILRKQ PGDKAIIIMI
ADAYMAKAKD QTEYIGWYYQ TDFEFLQDPS VKQVIIYGDT SLDLQLRLRL AGVDPAKTFV
ANSPEETADL VDLNACQHVF YAHGLYNGGI ADISRNRIIE RLKQMEASNE
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