Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1326 |
Symbol | |
ID | 8414211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1489348 |
End bp | 1490094 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645022923 |
Product | CobB/CobQ domain protein glutamine amidotransferase |
Protein accession | YP_003180341 |
Protein GI | 257785124 |
COG category | [R] General function prediction only |
COG ID | [COG3442] Predicted glutamine amidotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000536393 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000591695 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAATC CAGCAACTAA GATTGAGATT CTTTATCCAG AGTATGGCAA CCAGGGTGGA GATAACGGAA ATGCTCTCTA CCTGGAGGCT TGTCTCCCAA AAGAGAACTT TGTGTATACC TCTCATGCCG CGACGCCTTA CTTTGTGGAA CATACACCGT CAGCAATCAT CATGGGTGGC ATGACAGAGG CTCAGCAAGA GCTTATTATT TCTCGCCTCA TGCCTTACAA GGATAGACTG GCTGAACTGG CTGATCAGGG CGTCCCTATG CTGTTTACCG GTAACGCTTC AGAGCTTTTT GGCGAGAAAA TCGTTAATCC AGACGGCTCT GAAATTAAAG GCTTGGGTTT GTTCAAATTC ACGACTACTC GTTATATGCC TCAGCGCTTC CACGACGTTC AGGTGGGAGA GTTTGATCCC GGCAACGGCA AAGAGCCTTT TACTGTTGTT GGCTTTAAGA TGCAGTTCAC GCTTACTGAG GGAGATAACT CCAACTGCCA TTTTCTTAAA AATAAGGTAG GTTTTGGCAT CAATAAAGAA AGCAAGTTGG AAGGTTTCCG ACGCAAGAAC GCTATTGCCA CCTGGCTTAT TGGTCCGCTG CTTCCACTCA ACCCTTACCT CACACGTTGG ATTTTGGATA TGGCGGGTGA AAAAGACACT CCTCTTGCCT TTGAAGAAGA GGCTATTGCT GCATATCAAA AGCATGCTCG CGAGATGGTC TATCCAGGAA TGCATTTGCA TTACTAG
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Protein sequence | MSNPATKIEI LYPEYGNQGG DNGNALYLEA CLPKENFVYT SHAATPYFVE HTPSAIIMGG MTEAQQELII SRLMPYKDRL AELADQGVPM LFTGNASELF GEKIVNPDGS EIKGLGLFKF TTTRYMPQRF HDVQVGEFDP GNGKEPFTVV GFKMQFTLTE GDNSNCHFLK NKVGFGINKE SKLEGFRRKN AIATWLIGPL LPLNPYLTRW ILDMAGEKDT PLAFEEEAIA AYQKHAREMV YPGMHLHY
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